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Python |
2 |
coding sequence MSA（multiple sequence alignment） |
Apr 22, 2023 |
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Python |
6 |
MSA(Multiple Sequence Alignment) visualization python package for sequence analysis |
Nov 19, 2022 |
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None |
2 |
MSA(Multiple Sequence Alignment) visualization python package for sequence analysis |
Jan 15, 2024 |
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TypeScript |
10 |
Visualize sequence and multiple sequence alignment (MSA) |
May 03, 2023 |
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HTML |
7 |
plot Multiple Sequence Alignment(MSA) of Clustal by python package |
Jul 25, 2022 |
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Crystal |
2 |
convert alignment bam to pairwise alignment or multiple sequence alignment (msa) at genome specific region |
Apr 12, 2022 |
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C |
18 |
RNAcode - Detecting protein coding genes in multiple sequence alignment |
Jan 18, 2023 |
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JavaScript |
2 |
DNA Multiple Sequence Alignment. This is a human computing game for DNA sequence alignment. (made … |
Jan 14, 2022 |
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C++ |
5 |
Multiple Sequence Alignment |
Jul 02, 2021 |
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Python |
33 |
Neural Networks for Protein Sequence Alignment |
Aug 16, 2022 |
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C |
74 |
A collection of tools for Multiple Alignments of DNA, RNA, Protein Sequence |
Mar 16, 2023 |
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Java |
4 |
Sequence Similarity and Identity Calculator (DNA + Protein) |
Nov 08, 2021 |
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Perl |
8 |
RNA Multiple Sequence Alignment |
Nov 28, 2022 |
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JavaScript |
9 |
Multiple sequence alignment browser |
May 04, 2023 |
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Perl |
2 |
RNA Multiple Sequence Alignment |
May 20, 2022 |
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JavaScript |
18 |
Multiple sequence alignment visualizer |
Nov 17, 2022 |
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Python |
12 |
ProNA2020: System predicting protein-DNA, protein-RNA and protein-protein binding sites from sequence |
Apr 19, 2023 |
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None |
2 |
ProNAhot: Predicting protein-DNA, protein-RNA and protein-protein binding hot-spots from sequence |
Jun 14, 2022 |
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TypeScript |
157 |
a JavaScript DNA, RNA, and protein sequence viewer |
May 05, 2023 |
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HTML |
4 |
a multiple sequence alignment tool |
Dec 21, 2021 |
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TypeScript |
5 |
A multiple sequence alignment viewer |
Apr 13, 2022 |
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HTML |
2 |
Multiple sequence alignment visualization component |
Sep 09, 2022 |
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R |
2 |
hidden markov model for sentiment analysis |
Apr 22, 2022 |
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Clojure |
82 |
A DNA Sequence Alignment/Map (SAM) library for Clojure |
Jun 27, 2022 |
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C |
7 |
A toolkit for DNA sequence analysis |
Feb 14, 2022 |
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Perl |
5 |
BioPerl tools for Hidden Markov Model analysis |
Sep 02, 2019 |
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Python |
2 |
[Default] High Order Hidden Markov Model for accurate sequence Classification. |
Mar 28, 2022 |
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HTML |
2 |
Analyzes residue conservation in multiple sequence alignment. |
Nov 28, 2020 |
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Go |
4 |
Find most likely sequence of hidden states (Viterbi path) in a hidden Markov model |
May 21, 2018 |
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R |
3 |
Epigenomic R-Based Analysis With Hidden Markov Models |
Mar 23, 2023 |
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TypeScript |
2 |
A DNA and protein sequence viewer developed and maintained by Anocca |
May 17, 2022 |
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Java |
2 |
Program which evolves a protein chain based on a hidden Markov model. |
Jan 18, 2014 |
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Python |
8 |
Python Hidden Markov Models framework. Adapted for computationally optimal Viterbi forced alignment. |
Jan 16, 2022 |
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C++ |
8 |
Deep Learning based Progressive Alignment for Multiple Protein Sequences |
Aug 15, 2022 |
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Java |
5 |
do multiple nucleotide sequence alignment fast and accurately |
Aug 06, 2022 |
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JavaScript |
2 |
Modular BioJS compoment for a multiple sequence alignment |
May 27, 2022 |
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JavaScript |
3 |
multiple sequence alignment browser plugin for JBrowse 2 |
Jan 11, 2022 |
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Python |
38 |
Reference-guided multiple sequence alignment of viral genomes |
Jul 21, 2022 |
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C++ |
2 |
do multiple nucleotide sequence alignment fast and accurately |
Jan 06, 2023 |
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C |
2 |
The Multiple Sequence Alignment which developed by Wym6912 |
May 10, 2023 |
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Jupyter Notebook |
2 |
Support for multiple sequence alignment in QIIME 2. |
Jan 16, 2024 |
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JavaScript |
17 |
📊 A React component to interactively view multiple sequence alignments (MSA). |
Jul 11, 2022 |
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ActionScript |
14 |
Web based DNA sequence editing and analysis tool |
Sep 27, 2021 |
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JavaScript |
2 |
React App with components for rendering protein, DNA, and RNA sequence logos |
May 27, 2023 |
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Python |
15 |
localCIDER - sequence analysis tool for disordered protein sequences |
Apr 21, 2023 |
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MATLAB |
14 |
Task-Evoked Dynamic Network Analysis through Hidden Markov Modelling |
Dec 26, 2022 |
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Jupyter Notebook |
30 |
Predict multiple protein conformations using sequence clustering and AlphaFold2. |
May 19, 2023 |
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Python |
23 |
Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning |
Apr 27, 2023 |
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R |
143 |
:traffic_light: Visualizing publication-quality multiple sequence alignment using ggplot2 |
Aug 11, 2022 |
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TeX |
8 |
Interface to Popular Multiple Sequence Alignment Tools - R-package |
May 31, 2022 |