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Nextflow |
4 |
Quantitative shotgun MS proteomics |
May 05, 2022 |
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Java |
6 |
DIA data analysis for Proteomics |
May 27, 2022 |
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R |
9 |
Kinase Activity Predictions from shotgun proteomics |
Sep 01, 2021 |
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R |
13 |
Proteomics Toolset for Integrative Data Analysis |
Jun 27, 2022 |
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Python |
6 |
A Shotgun Pipeline Toolkit App to export data into Shotgun. |
Dec 01, 2021 |
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Jupyter Notebook |
2 |
Isope Analysis of Proteomics Data |
Jun 30, 2022 |
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R |
10 |
Processing and analysis of proteomics data |
Jan 26, 2023 |
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Java |
79 |
A cross-platform Graphical User Interface (GUI) for running MSFragger and Philosopher - powered pipeline for … |
Aug 04, 2022 |
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None |
12 |
Computational analysis for mass spectrometry-based proteomics data |
Nov 21, 2021 |
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Python |
3 |
Toolkit Engine for Shotgun Create |
Nov 29, 2021 |
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HTML |
6 |
Material Quantitative Proteomics and Data Analysis Course |
Aug 03, 2022 |
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Python |
13 |
A Shotgun Pipeline Toolkit Engine for the Shotgun Web App |
Nov 29, 2021 |
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Perl |
3 |
ProNTo: Proteomics eNzymology Toolkit |
Nov 20, 2015 |
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R |
5 |
Proteomics analysis workflows |
Jan 01, 2024 |
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Vue |
24 |
A Ruby on Rails application for proteomics data analysis |
May 30, 2023 |
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|
Python |
2 |
Analysis of liver proteomics data from Aebersold lab |
Apr 28, 2020 |
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Python |
4 |
Workflow for meta-proteomics analysis |
Jul 31, 2022 |
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|
Python |
19 |
Shotgun Pipeline Toolkit App Template |
Jul 10, 2022 |
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|
JavaScript |
5 |
Web-based framework for interactive visual analysis of proteomics data |
May 17, 2022 |
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|
Python |
5 |
A Shotgun Pipeline Toolkit Engine for Motionbuilder |
Nov 29, 2021 |
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|
Python |
8 |
A Shotgun Pipeline Toolkit Engine for Photoshop |
Feb 06, 2022 |
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Python |
10 |
A Shotgun Pipeline Toolkit engine for Flame |
Dec 06, 2021 |
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Python |
2 |
A Shotgun Pipeline Toolkit engine for Mari |
Mar 24, 2022 |
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|
Python |
16 |
A Shotgun Pipeline Toolkit Engine for Nuke |
Nov 29, 2021 |
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|
Python |
27 |
A Shotgun Pipeline Toolkit Engine for Houdini |
Jul 03, 2022 |
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Python |
38 |
A Shotgun Pipeline Toolkit Engine for Maya |
Apr 22, 2022 |
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JavaScript |
2 |
Mass spectrometry-based proteomics data management and analysis software |
Nov 28, 2022 |
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|
Python |
72 |
The Shotgun Pipeline Toolkit Core API |
May 29, 2022 |
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Python |
4 |
A Shotgun Pipeline Toolkit Engine for 3DS Max |
Nov 29, 2021 |
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Python |
4 |
A Shotgun Pipeline Toolkit Engine for the Terminal |
Nov 29, 2021 |
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|
Python |
33 |
The second generation default configuration for Shotgun Toolkit. |
May 29, 2022 |
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|
Python |
2 |
OONI Data Analysis ToolKit |
Sep 27, 2019 |
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|
Python |
3 |
Spark package to perform downstream analysis of big data proteomics |
Apr 10, 2022 |
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R |
2 |
Bioinformatic Analysis of Proteomics Data From Breast Tumour Intersitital Fluid. |
Aug 19, 2022 |
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R |
2 |
Annotation hub data for proteomics data |
Jan 06, 2022 |
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|
Jupyter Notebook |
17 |
Python Package for the downstream analysis of mass-spectrometry-based proteomics data |
Apr 26, 2023 |
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C++ |
141 |
DIA-NN - a universal automated software suite for DIA proteomics data analysis. |
Apr 04, 2023 |
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R |
11 |
:apple: Web-based User-friendly Workflow for Metabolomics and Proteomics Data Analysis |
Jan 08, 2022 |
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Python |
4 |
Toolkit for analysis of radiotherapy data |
Jun 17, 2023 |
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|
Jupyter Notebook |
2 |
Short course on GENESIS analysis toolkit for COMPLETE workshop 2019 |
Jul 16, 2020 |
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|
R |
30 |
Code and analysis results for the CRC shotgun meta-analysis |
Mar 28, 2023 |
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|
Python |
9 |
A File Manager App for the Shotgun Pipeline Toolkit |
Apr 13, 2021 |
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|
Visual Basic .NET |
5 |
bionovogene Metagenomics/proteomics data analysis pipeline based on SMRUCC/GCModeller platform |
Aug 02, 2021 |
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|
Jupyter Notebook |
2 |
Molecular biology experiments, mass spectrometry-based proteomics, and reproducible data analysis |
Jul 27, 2023 |
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Python |
4 |
Python Exploratory Data Analysis Toolkit |
Nov 04, 2021 |
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|
Python |
119 |
Experimental parallel data analysis toolkit. |
Jun 18, 2022 |
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|
TeX |
69 |
Using R and Bioconductor packages for the analysis and comprehension of proteomics data. |
Mar 20, 2023 |
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|
Perl |
7 |
Complete analysis pipeline for PAR-CLIP data |
Dec 31, 2022 |
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R |
36 |
R package for analysing proteomics data |
May 19, 2023 |
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R |
4 |
Analysis of RNA epitranscriptome sequencing data with affinity-based shotgun sequencing approach |
Jul 03, 2022 |