|
|
Python |
121 |
a signal-level demultiplexer for Oxford Nanopore reads |
Mar 08, 2023 |
|
|
C |
28 |
a tool for simulating nanopore raw signal data |
Apr 01, 2023 |
|
|
Python |
33 |
Detecting methylation using signal-level features from Nanopore sequencing reads of plants |
Aug 12, 2022 |
|
|
C++ |
249 |
adapter trimmer for Oxford Nanopore reads |
Apr 23, 2023 |
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|
Jupyter Notebook |
39 |
Experimental pipeline for correcting nanopore reads |
Sep 17, 2022 |
|
|
Python |
2 |
A PyTorch Basecaller for Oxford Nanopore Reads |
May 06, 2022 |
|
|
Python |
331 |
A PyTorch Basecaller for Oxford Nanopore Reads |
Apr 27, 2023 |
|
|
C++ |
145 |
A LibTorch Basecaller for Oxford Nanopore Reads |
Apr 27, 2023 |
|
|
C |
96 |
Flip-flop basecaller for Oxford Nanopore reads |
Jan 28, 2023 |
|
|
Python |
108 |
Training models for basecalling Oxford Nanopore reads |
Jan 28, 2023 |
|
|
C++ |
7 |
A LibTorch Basecaller for Oxford Nanopore Reads |
Feb 21, 2023 |
|
|
C++ |
36 |
VBZ compression plugin for nanopore signal data |
Mar 29, 2023 |
|
|
Jupyter Notebook |
25 |
Signal based nanopore RNA demultiplexing with convolutional neural networks |
Sep 29, 2022 |
|
|
Python |
103 |
SquiggleKit: A toolkit for manipulating nanopore signal data |
Sep 08, 2022 |
|
|
C |
12 |
A simple toolkit for manipulating nanopore signal data |
Mar 24, 2023 |
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|
C++ |
27 |
A streaming method for mapping nanopore raw signals |
Mar 30, 2023 |
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|
R |
2 |
What's In my Nanopore reads, with Kraken2, in real-time |
May 08, 2022 |
|
|
HTML |
74 |
Nextflow pipeline for analysis of direct RNA Nanopore reads |
May 10, 2022 |
|
|
C++ |
58 |
Pod5: a high performance file format for nanopore reads. |
Apr 13, 2023 |
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|
Go |
18 |
antifreeze is a package that detects goroutines that have been waiting for too long |
Mar 03, 2023 |
|
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C++ |
2 |
Fast signal-level matching for direct RNA nanopore sequencing |
Feb 07, 2023 |
|
|
Python |
16 |
A segmentation toolkit for segment the Nanopore RNA signal. |
Mar 05, 2023 |
|
|
Vue |
26 |
real-time stream processing of DNA nanopore sequencer reads with dataflow |
Sep 09, 2021 |
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|
JavaScript |
15 |
Reads and visualizes raw elevation data with Leaflet |
Apr 16, 2023 |
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|
Python |
2 |
A script for sorting, assessing and converting Oxford Nanopore reads |
Nov 26, 2017 |
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Perl |
15 |
Versatile simulator for structural variance and Nanopore/PacBio sequencing reads |
Apr 27, 2023 |
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|
Python |
4 |
Pipeline to assemble oxford nanopore long sequencing reads and perform variant calling with long and … |
Apr 06, 2023 |
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JavaScript |
2 |
Solve crosswords that have been created with www.crossword-compiler.com |
May 09, 2016 |
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|
Python |
5 |
Assembly with RApid CONsensus from raw noisy long reads |
Oct 27, 2020 |
|
|
Python |
53 |
Correct mismatches, microindels, and noncanonical splice junctions in long reads that have been mapped to … |
Apr 30, 2023 |
|
|
Python |
24 |
A simple tool for extracting reads from Oxford Nanopore fast5 files |
Aug 05, 2022 |
|
|
Rust |
65 |
Minimal but speedy quality control for nanopore reads in Rust :bear: |
Jul 07, 2022 |
|
|
Nextflow |
33 |
Multi-platform genome assembly pipeline for Illumina, Nanopore and PacBio reads |
Mar 29, 2023 |
|
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JavaScript |
2 |
JavaScript library for unpacking values that have been packed with telepath |
Sep 06, 2023 |
|
|
C# |
3 |
Everything that Start should have been. |
Jul 09, 2021 |
|
|
Java |
80 |
All things that should have been. |
Aug 03, 2022 |
|
|
None |
33 |
A mixed-signal system on chip for nanopore-based DNA sequencing |
Feb 17, 2024 |
|
|
Python |
2 |
Pipeline for analysing M. tuberculosis nanopore reads and getting drug susceptibility information. |
Jan 28, 2023 |
|
|
R |
10 |
🛑 This package has been deprecated and datasets and functionality have been moved to the … |
Mar 01, 2023 |
|
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JavaScript |
3 |
React package that monitor internet signal strength. |
Aug 03, 2022 |
|
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Shell |
2 |
A Bash script for exploring the UP42 raw API |
Nov 13, 2021 |
|
|
R |
2 |
R Package for Exploring Models with Shiny App |
Mar 03, 2020 |
|
|
None |
4 |
compilation of libraries that have been helpful for data analysis |
Apr 05, 2022 |
|
|
JavaScript |
49 |
maximally minimal modules for the es6 that could have been |
Mar 29, 2019 |
|
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Perl |
4 |
A tool to do barcode splitting for stLFR raw reads |
Aug 08, 2022 |
|
|
Java |
2 |
CLI that prunes local git branches that have been merged |
Feb 21, 2023 |
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Python |
2 |
A pipeline that creates consensus sequences from a Nanopore reads. It clusters reads that are … |
May 15, 2022 |
|
|
Python |
62 |
A snakemake-based pipeline for assembling and polishing long genomes from long nanopore reads |
Jul 22, 2022 |
|
|
HTML |
9 |
Companion package for the book Exploring Data with R |
Sep 12, 2021 |
|
|
None |
12 |
Raw LoRa test signal samples for the gr-lora project. |
Dec 22, 2022 |