Stars
70
Forks
11
Language
Python
Last Updated
Nov 17, 2023
Similar Repos
| Repo | Language | Stars | Description | Updated At |
|---|---|---|---|---|
| Python | 11 | Remove pen-marking annotations on whole slide images(WSIs) for data achiving. | Jan 10, 2023 | |
| C++ | 45 | Conversion tool/library for converting whole slide images to DICOM | Aug 02, 2022 | |
| JavaScript | 6 | Simple web application for viewing whole-slide images | Jun 24, 2020 | |
| Jupyter Notebook | 24 | Large-Scale Canine Cutaneous Mast Cell Tumor Dataset for Mitotic Figure Assessment on Whole Slide Images | Aug 12, 2022 | |
| JavaScript | 4 | imagebox viewer of svs whole slide images | Jun 22, 2022 | |
| JavaScript | 4 | A multiresolution image viewer, optimized for whole slide images. | Jun 11, 2021 | |
| Python | 8 | Whole Slide image (WSI) conversion for brightfield histology images | Apr 10, 2023 | |
| Python | 4 | Extract patches from whole slide images with wsiprocess | Feb 01, 2022 | |
| Python | 6 | Python library for reading whole slide images in DICOM format | Dec 29, 2022 | |
| Jupyter Notebook | 13 | Interactive deep learning whole-cell segmentation and thresholding using partial annotations | Jul 01, 2022 | |
| Python | 8 | A plugin to read whole slide images within napari. | Mar 30, 2023 | |
| Python | 15 | Repository for "Gigapixel Whole-Slide Images Classification using Locally Supervised Learning" | Mar 24, 2023 | |
| JavaScript | 2 | Web-based viewer for DICOM Visible Light Whole Slide Microscopy Images | May 04, 2022 | |
| Matlab | 3 | A pipeline for extracting nuclear morphometry features from whole-slide images. | Jul 14, 2021 | |
| Python | 24 | Lazily load multiscale whole-slide images with openslide and dask | Jul 19, 2022 | |
| Python | 6 | classifying pathological-images using deep learning on the whole slide | Jan 07, 2023 | |
| MATLAB | 2 | Perform multi-modality whole slide to whole slide pathology image registration | Jun 01, 2023 | |
| Python | 11 | A workflow for redacting PHI from whole slide images (WSI) based on the Digital Slide … | Mar 28, 2023 | |
| Python | 3 | Tools to analyze Pathology images (Whole Slide Images, WSIs) based on Deep learning. | Mar 12, 2022 | |
| C++ | 6 | Whole Cell Simulator | Jul 22, 2022 | |
| Python | 2 | Whole Slide Image Deidentification for PHI | Nov 10, 2022 | |
| Python | 125 | Automated 3D cell detection and registration of whole-brain images | Aug 13, 2022 | |
| C++ | 523 | Program for the analysis and visualization of whole-slide images in digital pathology | May 01, 2023 | |
| Python | 13 | :fire: :rocket: Blazingly fast pipeline for patch-based classification in whole slide images | May 11, 2023 | |
| JavaScript | 20 | A tool for training machine-learning models with whole-slide imaging datasets | Mar 15, 2023 | |
| Python | 12 | Simple prototype of converting whole slide image (WSI) to multiframe DICOM images | Apr 14, 2023 | |
| Python | 18 | A whole-slide image reader for TensorFlow | Mar 08, 2023 | |
| Python | 5 | Utilities for handling whole slide images from the The Cancer Genome Atlas (TCGA) Dataset | Mar 09, 2022 | |
| Jupyter Notebook | 15 | Large-Scale Canine Mammary Carcinoma Dataset for Mitotic Figure Assessment on Whole Slide Images | Jun 24, 2022 | |
| Jupyter Notebook | 49 | Multimodal Co-Attention Transformer for Survival Prediction in Gigapixel Whole Slide Images - ICCV 2021 | Aug 09, 2022 | |
| Python | 67 | Codes for Fast GPU-Enabled Color Normalization of Whole Slide Images in Digital Pathology | Apr 19, 2023 | |
| Python | 12 | Quality control of whole-slide images through multi-class semantic segmentation of artifacts | Apr 12, 2023 | |
| Python | 2 | Make patches from whole slide image. | Sep 30, 2022 | |
| Python | 21 | Re-stained whole slide image alignment | May 22, 2023 | |
| Python | 2 | Tools for dividing pathology whole slide images into tiles and save them as individual files. | Feb 17, 2023 | |
| Python | 6 | The implementation of Adversarial Multiple Instance Learning for the Survival Analysis on Whole-Slide Images | May 23, 2023 | |
| Python | 62 | A graph-transformer for whole slide image classification | Apr 19, 2023 | |
| Jupyter Notebook | 3 | Tools for whole slide image processing and classification | May 09, 2023 | |
| Python | 412 | Data-efficient and weakly supervised computational pathology on whole slide images - Nature Biomedical Engineering | Aug 12, 2022 | |
| JavaScript | 17 | Strip potentially identifying label and macro images from Aperio SVS whole slide image files | Mar 14, 2023 | |
| JavaScript | 2 | JavaScript images slide | Apr 05, 2022 | |
| Python | 2 | Whole Slide Imaging Pre-processing for ICIAR 2018 Challenge | Sep 09, 2022 | |
| Jupyter Notebook | 3 | NEMESIS: NEural iMplicit rEpresentation for whole Slide Image regiStration | Jan 19, 2024 | |
| Python | 4 | Interactive modules to digitally annotate H&E whole slide images, construct cell and tissue level features … | Jan 10, 2023 | |
| Jupyter Notebook | 3 | Getting my hand dirty on nuclei detection and segmentation algorithms on Whole-Slide Pathology Images | Feb 03, 2021 | |
| Jupyter Notebook | 5 | GraphLSurv: A Scalable Survival Prediction Network with Adaptive and Sparse Structure Learning for Histopathological Whole-Slide … | May 24, 2023 | |
| Python | 2 | This repo provides an exhaustive pipeline of processing TCGA whole-slide images for downstream multiple instance … | May 18, 2023 | |
| Python | 8 | Code available of a preprint paper "Cervical Glandular Cell Detection from Whole Slide Image with … | Mar 07, 2023 | |
| Python | 38 | Delete the label from a whole-slide image | Jul 18, 2022 | |
| Ruby | 2 | SlideShare slide images downloader | Jul 19, 2016 |