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Rust |
9 |
a Rust crate for working with a local copy of the NCBI Taxonomy database |
Dec 10, 2020 |
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|
Go |
220 |
A Practical and Efficient NCBI Taxonomy Toolkit |
Oct 20, 2022 |
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|
Perl |
3 |
taxon-utils: utils for NCBI taxonomy manipulation |
Mar 04, 2021 |
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|
R |
3 |
R package to merge the NCBI taxonomy and the GBIF backbone taxonomy |
Jun 08, 2022 |
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|
C++ |
27 |
Useful tools for working with Salmon output |
Jul 06, 2022 |
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Python |
10 |
Tools for working with DynAdjust input and output files |
Apr 11, 2023 |
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Java |
3 |
Code snippets and tools for working with QuickNII output |
May 09, 2022 |
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Perl |
2 |
Methods in various languages for how to create a fast database from NCBI Taxonomy |
Oct 23, 2023 |
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|
Python |
5 |
Finds taxonomic information for a given set of genbank identifiers, using the NCBI taxonomy database. |
Jan 28, 2023 |
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Rust |
2 |
`nwr` is a command line tool for NCBI taxonomy and newick files. |
Jan 27, 2023 |
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JavaScript |
3 |
A QuickAdd script for use with Obsidian that uses the ncbi taxonomy API |
Dec 23, 2022 |
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Python |
34 |
Taxon Information Query - fast, offline querying of NCBI Taxonomy and related data |
Jul 07, 2022 |
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|
Python |
9 |
Scripts and steps for making a consolidated COG database file for tools like DIAMOND. |
Mar 17, 2023 |
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None |
7 |
NCBI-style taxdump files for International Committee on Taxonomy of Viruses (ICTV) |
Aug 31, 2022 |
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Python |
2 |
Tools and scripts for studying the GTDB taxonomy with sourmash |
Mar 05, 2021 |
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None |
2 |
Documentation, tools and issues for implementing standardized tools for working with model data (data output … |
Jan 28, 2023 |
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Python |
2 |
tools for working with eMammal, including web scrapers, database clients, and converters. |
Nov 21, 2021 |
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Go |
2 |
Package with tools for working with the pebble embedded database engine. |
May 26, 2023 |
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Jupyter Notebook |
4 |
Develop tools and information for NCBI Hackathons and Workshops |
Jun 11, 2020 |
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Python |
2 |
Find for your input taxonomy the taxonomy from an other database |
Jan 13, 2023 |
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|
Python |
66 |
Galaxy wrappers for NCBI BLAST+ and related BLAST tools. |
Jan 19, 2023 |
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R |
134 |
Tools for Working with ... |
Jun 29, 2022 |
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Python |
33 |
Tools for working with the GeMS geologic map database schema in ArcGIS |
May 28, 2022 |
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Python |
5 |
Tools and scripts for working with ELAN |
May 30, 2022 |
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Python |
14 |
Tools for working with KGCL |
Aug 08, 2022 |
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Java |
89 |
Tools for working with sstables |
Mar 10, 2023 |
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C# |
2 |
Tools for working with OpenStreetMap |
Nov 17, 2022 |
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PHP |
2 |
Tools for working with formulas |
Apr 14, 2023 |
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Python |
2 |
Tools for working with Keras. |
Jan 28, 2023 |
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Python |
2 |
tools for working with isos |
Feb 10, 2022 |
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C# |
9 |
Tools for working with Modbus. |
Aug 23, 2022 |
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Python |
3 |
tools for working with condor |
Feb 13, 2014 |
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Common Lisp |
2 |
Tools for working with Electron |
May 01, 2019 |
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|
Perl |
36 |
:octopus: A curated database of completed assemblies with taxonomy IDs |
Mar 16, 2023 |
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|
Python |
637 |
Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API … |
Sep 02, 2022 |
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R |
2 |
An R package for working with FAVE output |
Oct 24, 2020 |
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Python |
6 |
Python tools and APIs for working with AWS |
Jun 01, 2022 |
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|
Python |
9 |
Tools for working with Pandas, Plotly, and Dash. |
Jul 26, 2022 |
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|
Ruby |
11 |
Ruby library and tools for working with datapackages |
Aug 20, 2021 |
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Julia |
3 |
Tools for defining and working with POMDPs.jl models. |
Jan 27, 2023 |
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Python |
5 |
Tools for working with scikit-learn and dask. |
Jun 19, 2019 |
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|
None |
2 |
Various tools for working with Fallout and CK |
Apr 10, 2022 |
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|
Python |
54 |
Tools for working with Singer Taps and Targets |
Aug 12, 2022 |
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|
Python |
63 |
Tools for working with and visualizing environmental simulations. |
Apr 14, 2023 |
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|
Haskell |
2 |
Library and tools for working with Kicad designs |
Dec 05, 2019 |
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R |
2 |
:wrench: Tools for working with DLMtool and MSEtool |
Jan 25, 2023 |
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|
JavaScript |
106 |
Helpful Tools and Utilities for working with WebRTC |
Jul 29, 2021 |
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R |
2 |
Tools for working with Github and Github Actions |
Dec 19, 2023 |
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Shell |
3 |
CREATE scripts and documentation for the Diamond flavour of the ISPyB database |
Dec 14, 2022 |
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None |
6 |
:whale: Galaxy Docker repository with NCBI Blast tools (Galaxy Blast flavour) |
Jan 10, 2020 |