Stars
9
Forks
1
Language
C++
Last Updated
Jan 07, 2024
Similar Repos
Repo | Language | Stars | Description | Updated At |
---|---|---|---|---|
Python | 2 | Single-cell RNA Sequencing Data Analysis | Jul 14, 2023 | |
Shell | 2 | Single Cell RNA-Seq Imputation | Mar 31, 2021 | |
Nextflow | 2 | Single Cell Genome Sequencing data analysis pipeline | Nov 08, 2022 | |
Common Workflow Language | 4 | CWL toolkit for single-cell sequencing data analysis | Jan 22, 2023 | |
HTML | 2 | single-cell sequencing,TCR analysis,scRNA-sequencing | Jan 22, 2024 | |
Python | 26 | AutoImpute : Autoencoder based imputation of single cell RNA-seq data | Feb 14, 2023 | |
R | 8 | Post hoc cell type classification of single-cell RNA-sequencing data. | Oct 05, 2021 | |
HTML | 13 | single cell sequencing analysis tutorial | Jun 02, 2022 | |
Python | 6 | Single cell Nanopore sequencing data for Genotype and Phenotype | May 10, 2023 | |
HTML | 4 | Imputing dropout events in single-cell RNA-sequencing data. | May 07, 2021 | |
Jupyter Notebook | 17 | MAGIC - imputation and de-noising single-cell RNA seq data sets | Mar 21, 2023 | |
MATLAB | 3 | Single Cell RNA-Seq imputAtion constrained By BuLk RNAsEq data (SCRABBLE) | Oct 14, 2020 | |
R | 24 | Bi-order integration (in silico multi-omics data) of single cell RNA sequencing, single cell ATAC sequencing, … | May 16, 2022 | |
HTML | 82 | Single cell RNA sequencing analysis course | Aug 16, 2022 | |
Python | 8 | SNV calling from single cell sequencing | Apr 24, 2023 | |
Python | 40 | Metacells - Single-cell RNA Sequencing Analysis | May 05, 2023 | |
Python | 11 | A single cell sequencing read simulator. | Mar 27, 2023 | |
Python | 2 | Awesome single-cell CITE-sequencing Pipeline | Jul 19, 2022 | |
R | 21 | benchmark for single-cell RNA-seq imputation methods | Mar 16, 2023 | |
Python | 22 | CpG Transformer for imputation of single-cell methylomes | Apr 05, 2023 | |
R | 2 | Identifying key genes and cell subclusters for time-series single cell sequencing data | Jul 13, 2022 | |
R | 136 | Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data | Aug 12, 2022 | |
R | 3 | Somatic stem and progenitor cell identification based on single-cell RNA-sequencing data | Jan 25, 2020 | |
Nextflow | 12 | Complete analysis workflow for single-cell/nuclei RNA-sequencing data. | Jan 05, 2022 | |
Jupyter Notebook | 40 | Identify cell barcodes from single-cell genomics sequencing experiments | May 06, 2022 | |
Python | 14 | Evaluation of cell-cell interaction methods by integrating single-cell RNA sequencing data with spatial information | Apr 12, 2023 | |
R | 3 | single cell RNA sequencing for mouse choroid | Sep 30, 2020 | |
None | 2 | Single-cell sequencing of the proliferative endometrium | May 20, 2021 | |
R | 2 | Perform Exploratory Computational Analyses on Processed Single-Cell RNA-Sequencing Data | Apr 28, 2022 | |
R | 255 | R package for detecting doublets in single-cell RNA sequencing data | Apr 28, 2023 | |
R | 7 | External single-cell mRNA sequencing data sets for use with clustifyr | Mar 06, 2023 | |
Python | 14 | A Python package for jointly analyzing multimodal single-cell sequencing data | Feb 12, 2023 | |
C++ | 6 | Clustering tumor cells based on SNVs from single-cell sequencing data | Apr 02, 2023 | |
R | 2 | R package for detecting doublets in single-cell RNA sequencing data | Dec 17, 2023 | |
Python | 8 | Single nucleotide variant (SNV) detection and genotyping algorithm for single-cell DNA sequencing data | Mar 02, 2022 | |
Python | 96 | scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural … | May 09, 2023 | |
Python | 80 | An accurate and efficient deep learning method for single-cell RNA-seq data imputation | Mar 21, 2023 | |
TeX | 5 | My PhD thesis - "Tools and techniques for single-cell RNA sequencing data" | Feb 20, 2020 | |
R | 9 | Identified novel mouse spermatogenesis biomarkers based on single-cell RNA sequencing data | Feb 01, 2022 | |
C++ | 29 | Software for exploration of gene expression data from single-cell RNA sequencing. | May 10, 2022 | |
R | 37 | R package of techniques for comparing clusterings of single-cell sequencing data | Feb 12, 2023 | |
R | 4 | Tidy Transcriptomics for Single-cell RNA Sequencing Analyses | Jun 27, 2022 | |
R | 2 | single cell RNA sequencing for aged mouse choroid | Sep 30, 2020 | |
Python | 13 | Single-Cell Sequencing Quality Control and Processing Software | Apr 13, 2023 | |
R | 27 | Genetic Heterogeneity Profiling by Single Cell RNA Sequencing | May 12, 2023 | |
HTML | 3 | Third-generation single cell sequencing (Pacbio) analysis pipeline. | Apr 23, 2023 | |
Python | 3 | Imputation workflow for low coverage whole genome sequencing data | Apr 10, 2023 | |
Jupyter Notebook | 42 | A benchmark of batch-effect correction methods for single-cell RNA sequencing data | Aug 09, 2022 | |
Jupyter Notebook | 4 | Out-of-distribution prediction with disentangled representations for single-cell RNA sequencing data | Feb 24, 2022 | |
R | 21 | an integrative analysis tool for analysing large-scale single cell RNA-sequencing data | Apr 13, 2023 |