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Go |
2 |
A cross-platform and ultrafast toolkit for FASTA/Q file manipulation in Golang |
Jun 25, 2017 |
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Go |
918 |
A cross-platform and ultrafast toolkit for FASTA/Q file manipulation in Golang |
Oct 18, 2022 |
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C++ |
5 |
FASTA/FASTQ alignment |
Jun 26, 2018 |
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Python |
4 |
Toolkit for binning FASTA, FASTQ and FAST5 files according to taxonomic annotation |
Nov 19, 2021 |
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Rust |
8 |
deduplicate FASTA and FASTQ files |
Mar 22, 2022 |
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Python |
26 |
Versatile FASTA/FASTQ demultiplexer. |
Apr 21, 2023 |
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Python |
2 |
Simplest possible fasta/fastq parser |
Nov 22, 2022 |
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JavaScript |
2 |
Simple nodejs fasta/fastq parser |
Feb 11, 2021 |
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C |
2 |
FASTA/FASTQ pre-processing programs |
Jul 14, 2020 |
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C++ |
8 |
BamDeal: a comprehensive toolkit for bam manipulation |
Feb 03, 2023 |
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Shell |
3 |
fasta file manipulation tools in one bash script |
Mar 17, 2023 |
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C++ |
15 |
DuckDB Extension for reading and writing FASTA and FASTQ Files |
Apr 24, 2023 |
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Python |
29 |
Read and write FASTQ and FASTA efficiently from Python |
Aug 11, 2022 |
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C |
2 |
A simple program to split sequences from a FASTA/FASTQ file into k-mers in the FASTA … |
Dec 15, 2021 |
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C |
3 |
An approximate sequence pattern matcher for FASTQ/FASTA files. |
Jan 28, 2023 |
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C |
30 |
An approximate sequence pattern matcher for FASTQ/FASTA files. |
Mar 11, 2023 |
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Rust |
2 |
FASTA/FASTQ extractor for multiple sets of read names |
Jan 17, 2024 |
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Rust |
3 |
Extract protein and DNA k-mers from FASTA/FASTQ files |
Jul 20, 2020 |
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Python |
4 |
Simple python scripts to deal with fastq and fasta sequences |
Jan 16, 2023 |
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Julia |
40 |
Parse and process FASTA and FASTQ formatted files of biological sequences. |
Aug 13, 2022 |
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Rust |
2 |
a collection of CLI utilities for processing fasta/fastq (FASTX) files. |
Jan 04, 2024 |
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Python |
26 |
Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files. |
Aug 11, 2022 |
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Python |
2 |
FASTA file reader. |
Mar 19, 2023 |
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C |
2 |
search through Fasta and Fastq files as fast as grep (because it is) |
Jan 02, 2014 |
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Python |
8 |
Split multi fasta file into single fasta files |
Jan 03, 2023 |
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Rust |
3 |
A fast bioinformatics tool for (colored) cDBG construction from reads in .fasta and .fastq formats |
Oct 14, 2022 |
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Perl |
47 |
A collection of scripts developed to interact with fasta, fastq and sam/bam files. |
Apr 18, 2022 |
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C |
1007 |
Toolkit for processing sequences in FASTA/Q formats |
Aug 11, 2022 |
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C |
2 |
Toolkit for processing sequences in FASTA/Q formats |
Nov 20, 2022 |
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Nextflow |
4 |
*de novo* orthologous gene predictions from bam + bed or fasta/fastq data |
Jul 22, 2021 |
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Perl |
48 |
Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts. |
Apr 13, 2023 |
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Python |
52 |
Atomistic Manipulation Toolkit |
Jul 26, 2022 |
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Python |
23 |
Atomistic Manipulation Toolkit |
Apr 18, 2022 |
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Rust |
43 |
:construction_worker: Fasten toolkit, for streaming operations on fastq files |
Mar 26, 2023 |
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C++ |
312 |
Kris' Locomotion and Manipulation Planning Toolkit |
May 08, 2023 |
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C |
2 |
Validation and manipulation of FASTQ files, scRNA-seq barcode pre-processing and UMI quantification. |
Sep 02, 2019 |
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Python |
56 |
Toolkit for manipulation and inspection of Sphinx objects.inv files |
Jul 28, 2022 |
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Python |
9 |
SeqWho - A reliable and rapid FASTQ(A) file classifier |
Aug 09, 2022 |
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Python |
137 |
Comprehensive markdown-based documentation toolkit |
May 06, 2023 |
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C++ |
19 |
File Interpolation, Manipulation and EXtraction |
Jan 03, 2022 |
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Python |
10 |
A comprehensive toolkit for mutational signature analysis |
Apr 24, 2023 |
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C |
5 |
C code to validate a fasta file |
Jul 24, 2021 |
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Python |
39 |
A comprehensive, unified and modular event extraction toolkit. |
Sep 13, 2022 |
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Python |
2 |
Script for converting a genbank file to a fasta file and a tsv file, for … |
Jan 05, 2021 |
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Lua |
3 |
Portable toolkit for manipulation of graphics images |
Dec 03, 2019 |
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Rust |
189 |
rust elf parsing, manipulation and (re)linking toolkit |
Jul 22, 2022 |
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TypeScript |
2 |
A web component that let you select FastA or FastQ sequence files and creates sketches … |
Apr 11, 2023 |
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Python |
5 |
A toolkit for image manipulation. Not for humans. |
Mar 09, 2022 |
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Go |
36 |
PE file mapping and manipulation package. |
Mar 24, 2023 |
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C |
34 |
Generate unique KMERs for every contig in a FASTA file |
Jan 03, 2023 |