|
None |
32 |
Predict 5mC in PacBio HiFi reads |
Jul 21, 2022 |
|
None |
5 |
Predict 5mC in PacBio HiFi reads |
Jun 15, 2023 |
|
None |
3 |
Extract PacBio HiFi reads from CCS BAM files |
Apr 14, 2022 |
|
None |
10 |
Small and structural variant phasing tool for PacBio HiFi reads |
Apr 27, 2023 |
|
Groovy |
6 |
Assemble PacBio Hifi reads into a genome and perform QC stats |
Apr 14, 2023 |
|
Shell |
12 |
Copy number variant caller and depth visualization utility for PacBio HiFi reads |
Apr 04, 2023 |
|
Python |
2 |
Identify and count PacBio Hifi amplicons |
Feb 16, 2023 |
|
Shell |
2 |
Convert .bam to .fastq and remove reads with remnant PacBio adapter sequences |
Feb 11, 2022 |
|
None |
3 |
SKERA - Deconcat PacBio reads |
Apr 23, 2023 |
|
Python |
19 |
Workflow for the comprehensive detection and prioritization of variants in human genomes with PacBio HiFi … |
Jul 07, 2022 |
|
None |
39 |
Tandem repeat genotyping and visualization from PacBio HiFi data |
Apr 09, 2023 |
|
Python |
9 |
Scripts for analyzing PacBio AAV sequences |
Mar 13, 2023 |
|
Nextflow |
2 |
Methylatino phasing using PacBio CCS reads |
Jun 27, 2022 |
|
Nextflow |
10 |
Nextflow pipeline to analyze PacBio HiFi full-length 16S data |
Aug 24, 2022 |
|
None |
84 |
CCS: Generate Highly Accurate Single-Molecule Consensus Reads (HiFi Reads) |
Aug 19, 2022 |
|
Python |
18 |
Detecting DNA methylation from PacBio CCS reads |
Jul 21, 2022 |
|
Python |
11 |
Phasing for metagenomics using PacBio long reads |
Jun 09, 2022 |
|
Python |
2 |
Assemble HiFi reads and identify genes of interest |
Dec 08, 2021 |
|
Python |
4 |
SARS-CoV-2 analysis using PacBio long reads |
Oct 05, 2021 |
|
Python |
105 |
PacBio Assembly Tool Suite: Reads in ⇨ Assembly out |
Aug 12, 2022 |
|
Perl |
54 |
Graph-based mapping of long sequences, noisy or HiFi. |
Sep 09, 2022 |
|
Python |
3 |
Identification of Plasmids from Pacbio Long Read Bacterial Sequences |
May 16, 2020 |
|
None |
7 |
Hifiasm: a haplotype-resolved assembler for accurate Hifi reads |
Jul 26, 2022 |
|
Rust |
13 |
Repeat-aware polishing genomes assembled using HiFi long reads |
Apr 28, 2023 |
|
None |
2 |
Mark duplicate reads from PacBio sequencing of an amplified library |
Nov 26, 2021 |
|
Perl |
15 |
Versatile simulator for structural variance and Nanopore/PacBio sequencing reads |
Apr 27, 2023 |
|
Python |
27 |
SMRT-SV: Structural variant and indel caller for PacBio reads |
Jan 28, 2023 |
|
None |
116 |
IsoSeq3 - Scalable De Novo Isoform Discovery from Single-Molecule PacBio Reads |
Aug 22, 2022 |
|
Nextflow |
33 |
Multi-platform genome assembly pipeline for Illumina, Nanopore and PacBio reads |
Mar 29, 2023 |
|
Python |
412 |
Cutadapt removes adapter sequences from sequencing reads |
Aug 30, 2022 |
|
C |
45 |
Pauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads. |
May 24, 2023 |
|
C++ |
15 |
Utility programs to trim or sort Illumina reads with adapter sequences |
Mar 27, 2023 |
|
Python |
2 |
Quantification of reads at defined positions to verify custom input sequences. |
Nov 29, 2023 |
|
C |
88 |
LongQC is a tool for the data quality control of the PacBio and ONT long … |
May 16, 2023 |
|
Python |
4 |
HiFi Amplicon Workflow |
Mar 14, 2023 |
|
Python |
2 |
Pipeline to provide high accuracy single molecule consensus sequences from PacBio data using unique molecular … |
Jul 18, 2022 |
|
None |
7 |
PacBio BAM toolkit |
Apr 11, 2023 |
|
Java |
2 |
a player that reads MIDI sequences and maps them to the keyboard |
Jul 06, 2022 |
|
Python |
2 |
Adaptation of contig based plasmid classification for error prone long reads (PacBio and ONT) to … |
Jun 06, 2022 |
|
C |
8 |
HiFi 5 NN Library |
Aug 11, 2022 |
|
Python |
14 |
curPrimers is a tool for trimming primer sequences from amplicon based NGS reads |
Nov 14, 2022 |
|
C++ |
18 |
PacBio BAM C++ library |
Mar 01, 2022 |
|
None |
2 |
Feather2RPIShield Adaptor |
Oct 22, 2020 |
|
None |
4 |
Prototipo HiFi del progetto scuole |
Nov 26, 2021 |
|
None |
3 |
Repository for Hifi Doc System |
Sep 15, 2020 |
|
C++ |
2 |
Firmware for Bpod HiFi Module |
Oct 12, 2021 |
|
Python |
7 |
Train HiFi-GAN on TPU |
May 31, 2023 |
|
R |
49 |
Lima - Demultiplex Barcoded PacBio Samples |
Jun 30, 2022 |
|
HTML |
3 |
FALCON: experimental PacBio diploid assembler |
Apr 25, 2018 |
|
Go |
81 |
citrix-xds-adaptor |
Dec 12, 2022 |