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Python |
5 |
BItsliced Genomic Signature Index - Efficient indexing and search in very large collections of WGS … |
Dec 14, 2022 |
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HTML |
128 |
Statistics course for JHU Genomic Data Science Sequence |
Jun 14, 2022 |
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R |
2 |
R package for handling large, sparse genomic data |
Dec 22, 2018 |
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Python |
3 |
Genomic sequence preprocessing toolkit |
Nov 27, 2023 |
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C |
16 |
A high-performance search engine for large-scale genomic interval datasets |
Nov 19, 2022 |
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None |
9 |
Code and workflows for large-scale genomic search of e.g. the Sequence Read Archive |
Jan 11, 2023 |
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Scala |
2 |
A search engine for sequence data |
Mar 13, 2019 |
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Python |
4 |
FastA indexing and sequence retrival. |
Oct 18, 2018 |
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Python |
3 |
Toolkit for analysis of ".hyb" format genomic sequence data from ribonomics experiments. |
Oct 08, 2021 |
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Java |
2 |
Micro-libraries for reading and writing genomic sequence data in various formats. |
Mar 04, 2022 |
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Go |
4 |
Indexing for Query Engine |
Feb 06, 2021 |
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Java |
2 |
Indexing engine for IndexTank |
Feb 22, 2021 |
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Java |
842 |
Indexing engine for IndexTank |
Apr 22, 2023 |
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Python |
145 |
Simulate genealogical trees and genomic sequence data using population genetic models |
Oct 12, 2022 |
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Rust |
176 |
Blockchain Indexing Engine |
Aug 10, 2022 |
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Rust |
3 |
Blockchain Indexing Engine |
Jan 31, 2023 |
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HTML |
34 |
Make colorful identity heatmaps of genomic sequence |
Jun 30, 2022 |
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C++ |
15 |
An MPI Toolkit for large-scale genomic analysis |
May 11, 2022 |
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HTML |
3 |
KLFDAPC: Kernel local Fisher discriminant analysis of principal components (KLFDAPC) for large genomic data |
May 17, 2022 |
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None |
14 |
Indexing data |
Jun 30, 2022 |
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Scala |
211 |
An open-source toolkit for large-scale genomic analysis |
Aug 12, 2022 |
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Java |
35 |
Large scale frequent sequence mining |
Jan 21, 2023 |
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Go |
35 |
sort genomic data |
Mar 04, 2023 |
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Erlang |
7 |
Erlang quadtrees with Z-order curve indexing |
Jan 28, 2023 |
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HTML |
14 |
CoV-Seq: COVID-19 Genomic Sequence Database and Visualization |
Jun 21, 2022 |
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Shell |
87 |
conda recipes for genomic data |
Aug 26, 2022 |
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R |
5 |
Functions for plotting genomic data. |
Feb 17, 2023 |
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Python |
22 |
Tools for munging genomic data |
Feb 22, 2023 |
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C++ |
17 |
C++ library for analysing and storing large-scale cohorts of sequence variant data |
Mar 02, 2021 |
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Java |
13 |
Large-Scale Sequence Mining with Hierarchies |
Mar 30, 2021 |
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C |
6 |
R binder for pairix - 2D/1D genomic indexing and querying on bgzipped text file |
Sep 16, 2021 |
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Java |
61 |
A framework for large-scale feature extraction, indexing and retrieval. |
Mar 26, 2023 |
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C++ |
4 |
Genomic data analysis suite |
Nov 02, 2022 |
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Jupyter Notebook |
9 |
functional genomic data integration |
May 16, 2023 |
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JavaScript |
7 |
Components for building genomic data browsers |
Jun 07, 2022 |
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C++ |
8 |
📖 Search Index for genomic data. |
Jan 29, 2020 |
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R |
9 |
OMOP-CDM Extension for genomic data |
Jul 11, 2021 |
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HTML |
12 |
Site for Genomic Data Science Class |
Feb 21, 2020 |
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Shell |
2 |
The genomic data for Papaver species |
Mar 03, 2022 |
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JavaScript |
15 |
Course website for Genomic Data Visualization |
Jul 27, 2022 |
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Python |
5 |
Pipeline for efficient genomic data processing. |
Mar 16, 2023 |
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Python |
9 |
Code for "Does Higher Order LSTM Have Better Accuracy for Segmenting and Labeling Sequence Data?" |
Sep 11, 2021 |
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JavaScript |
14 |
Data portal for submitting and viewing genomic data |
Feb 25, 2022 |
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C++ |
2 |
Analysis, organization and querying of large genomic datasets using C++, Monsoon and various data structures. |
May 02, 2022 |
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Java |
3 |
FAIR genomic tracks search and curation engine |
Mar 19, 2021 |
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C |
59 |
A genomic k-mer counter (and sequence utility) with nice features. |
Oct 05, 2022 |
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Lua |
41 |
Deep Motif (ICLR16)/ Deep Motif Dashboard (PSB17): Visualizing Genomic Sequence Classifications |
Dec 03, 2022 |
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Python |
6 |
Just an experiment with an algorithm for matching reads with genomic reference sequence. |
Jul 23, 2022 |
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None |
4 |
Apache Spark - A unified analytics engine for large-scale data processing |
Jun 13, 2022 |
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Scala |
4 |
Apache Spark - A unified analytics engine for large-scale data processing |
Jun 27, 2022 |