|
R |
39 |
Algorithm for the inference of cell types from single-cell RNA-seq data. |
Feb 15, 2023 |
|
R |
36 |
Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. |
Jul 21, 2022 |
|
R |
163 |
R package for analyzing single-cell RNA-seq data |
Apr 03, 2023 |
|
HTML |
2 |
Cluster single cell RNA-seq data |
Sep 30, 2020 |
|
R |
3 |
SCalable Inference of Regulatory Activity in Single Cell RNA-Seq data |
Apr 13, 2023 |
|
Jupyter Notebook |
84 |
scDeepCluster for Single Cell RNA-seq data |
Apr 18, 2023 |
|
Jupyter Notebook |
2 |
single-cell RNA-seq |
Mar 28, 2023 |
|
Python |
36 |
Dimensionality reduction for single cell RNA-seq data |
Dec 09, 2022 |
|
R |
342 |
Inferring CNV from Single-Cell RNA-Seq |
Aug 10, 2022 |
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Makefile |
22 |
Examples analyses using the single-cell RNA-seq data from mouse cell atlases |
May 20, 2022 |
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None |
13 |
10x single cell RNA-seq data from the developing mouse retina |
Aug 03, 2021 |
|
R |
30 |
R package for bcbio single-cell RNA-seq analysis. |
Apr 22, 2023 |
|
Python |
7 |
Single Cell RNA-seq Pipeline |
May 18, 2022 |
|
Shell |
2 |
Single Cell RNA-Seq Imputation |
Mar 31, 2021 |
|
Python |
2 |
Single cell RNA-seq tools |
Jul 20, 2022 |
|
Python |
4 |
single-cell RNA-seq clustering |
Jul 27, 2021 |
|
Python |
3 |
Discovering causal transcription factors from single-cell RNA-seq data |
Oct 03, 2022 |
|
HTML |
11 |
Isoform co-usage networks from single-cell RNA-seq data |
Dec 03, 2022 |
|
R |
7 |
An ExperimentHub package for the 1.3 million brain cell 10X single-cell RNA-seq data set. |
May 15, 2021 |
|
Python |
4 |
Single-cell RNA-seq data analysis and visualization |
Jun 12, 2022 |
|
TeX |
2 |
Analysis of single cell RNA-seq data course |
Sep 25, 2019 |
|
Jupyter Notebook |
2 |
Doublet detection in single-cell RNA-seq data. |
May 19, 2020 |
|
None |
27 |
Detect doublets in single-cell RNA-seq data |
Apr 05, 2023 |
|
TeX |
49 |
Analysis of single cell RNA-seq data course |
Apr 23, 2023 |
|
Python |
3 |
Doublet detection in single-cell RNA-seq data. |
Aug 22, 2018 |
|
R |
5 |
R package for for single-cell RNA-seq clustering analysis. |
May 11, 2022 |
|
Python |
155 |
Differential expression analysis for single-cell RNA-seq data. |
Apr 06, 2023 |
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None |
2 |
Differential expression analysis for single-cell RNA-seq data |
Apr 14, 2021 |
|
R |
9 |
Differential expression analysis for single-cell RNA-seq data |
Nov 15, 2022 |
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None |
3 |
Analysis code for lungfish single cell RNA-seq data |
Sep 22, 2023 |
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Makefile |
4 |
BCR reconstruction from short single cell RNA-seq |
Feb 21, 2021 |
|
R |
3 |
A tool for high-resolution cell population identification from single-cell RNA-seq data |
Mar 03, 2022 |
|
Java |
6 |
Single-Cell RNA Seq analysis and visualization package for Cytoscape |
Feb 14, 2022 |
|
Python |
47 |
Pileup biallelic SNPs from single-cell and bulk RNA-seq data |
Aug 11, 2022 |
|
R |
3 |
A single-cell RNA-seq pipeline |
Apr 20, 2023 |
|
Rust |
41 |
Single-Cell RNA-seq pseudo-aligner |
Mar 22, 2023 |
|
R |
22 |
Single cell RNA-seq analysis bundle |
Mar 28, 2023 |
|
R |
8 |
Core utilities for single-cell RNA-seq |
Dec 12, 2021 |
|
R |
2 |
Adaptive Visualization for Single-cell RNA-seq |
Apr 07, 2023 |
|
HTML |
16 |
Python package for analysis of multiomic single cell RNA-seq and ATAC-seq. |
Apr 25, 2022 |
|
R |
2 |
Preprocessing of Droplet-based Single-Cell RNA-seq Data |
Sep 24, 2020 |
|
Jupyter Notebook |
28 |
Supervised Adversarial Alignment of Single-Cell RNA-seq Data |
Jul 15, 2022 |
|
TeX |
49 |
Count HLA alleles in single-cell RNA-seq data |
Apr 19, 2023 |
|
Jupyter Notebook |
16 |
Pytorch implementation of scDeepCluster for Single Cell RNA-seq data |
Apr 30, 2023 |
|
R |
2 |
GCA: Gene Correlation Analysis for Single-cell RNA-seq data |
Jun 06, 2019 |
|
Jupyter Notebook |
2 |
Analysis of single-cell single-embryo RNA seq data from the zebrafish developmental atlas Zebrahub. |
Dec 11, 2023 |
|
R |
14 |
Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks |
Oct 28, 2022 |
|
R |
242 |
Table of software for the analysis of single-cell RNA-seq data. |
Aug 13, 2022 |
|
R |
3 |
Table of software for the analysis of single-cell RNA-seq data. |
Apr 08, 2022 |
|
R |
6 |
A robust and accurate cell type classifier for single cell RNA-seq data |
Jun 14, 2022 |