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R |
3 |
A single-cell RNA-seq pipeline |
Apr 20, 2023 |
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R |
9 |
Repository for CCBR single cell RNA-Seq pipeline |
Jun 16, 2022 |
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Jupyter Notebook |
2 |
single-cell RNA-seq |
Mar 28, 2023 |
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Groovy |
3 |
A Nextflow pipeline for single-cell RNA-Seq dataset |
Apr 21, 2024 |
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Shell |
2 |
Single Cell RNA-Seq Imputation |
Mar 31, 2021 |
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Python |
2 |
Single cell RNA-seq tools |
Jul 20, 2022 |
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Python |
4 |
single-cell RNA-seq clustering |
Jul 27, 2021 |
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HTML |
2 |
Cluster single cell RNA-seq data |
Sep 30, 2020 |
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Rust |
41 |
Single-Cell RNA-seq pseudo-aligner |
Mar 22, 2023 |
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R |
22 |
Single cell RNA-seq analysis bundle |
Mar 28, 2023 |
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Jupyter Notebook |
2 |
Pipeline for assembling TCRs from single-cell RNA-seq with TRACER |
May 15, 2021 |
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C++ |
72 |
Pipeline for initial analysis of droplet-based single-cell RNA-seq data |
Jul 07, 2022 |
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R |
8 |
Core utilities for single-cell RNA-seq |
Dec 12, 2021 |
|
R |
342 |
Inferring CNV from Single-Cell RNA-Seq |
Aug 10, 2022 |
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R |
2 |
Adaptive Visualization for Single-cell RNA-seq |
Apr 07, 2023 |
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Jupyter Notebook |
2 |
Single cell RNA-seq of human melanocytes |
Sep 23, 2021 |
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Jupyter Notebook |
63 |
Preprocessing of single-cell RNA-Seq (deprecated) |
Apr 08, 2022 |
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HTML |
19 |
HSCI/Catalyst Single-cell RNA-Seq Workshop |
Aug 29, 2022 |
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Jupyter Notebook |
84 |
scDeepCluster for Single Cell RNA-seq data |
Apr 18, 2023 |
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R |
2 |
single cell RNA-seq results report system |
Aug 08, 2023 |
|
HTML |
18 |
scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data |
May 14, 2023 |
|
Python |
5 |
Single cell ATAC-Seq Snakemake pipeline |
Sep 25, 2021 |
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Python |
3 |
Single Cell RNA-seq Analysis by Topic Modeling |
May 24, 2022 |
|
Python |
4 |
Single-cell RNA-seq data analysis and visualization |
Jun 12, 2022 |
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TeX |
2 |
Analysis of single cell RNA-seq data course |
Sep 25, 2019 |
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C++ |
88 |
Genetic multiplexing of barcoded single cell RNA-seq |
Jul 13, 2022 |
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Jupyter Notebook |
2 |
Doublet detection in single-cell RNA-seq data. |
May 19, 2020 |
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None |
27 |
Detect doublets in single-cell RNA-seq data |
Apr 05, 2023 |
|
TeX |
49 |
Analysis of single cell RNA-seq data course |
Apr 23, 2023 |
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Makefile |
4 |
BCR reconstruction from short single cell RNA-seq |
Feb 21, 2021 |
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Python |
36 |
Dimensionality reduction for single cell RNA-seq data |
Dec 09, 2022 |
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R |
19 |
scGSVA: Perform GSVA for single cell RNA seq |
Mar 10, 2023 |
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R |
2 |
single cell RNA-seq survey of childhood medulloblastoma |
Apr 13, 2023 |
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Python |
3 |
Doublet detection in single-cell RNA-seq data. |
Aug 22, 2018 |
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R |
21 |
benchmark for single-cell RNA-seq imputation methods |
Mar 16, 2023 |
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Python |
4 |
Single Cell RNA-Seq analysis toolbox for Python |
Sep 13, 2018 |
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R |
2 |
Analysis Pipeline for Single Cell ATAC-seq |
Jul 30, 2022 |
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Nextflow |
14 |
A pipeline for processing single cell RNA-seq data generated with the SmartSeq2 protocol. |
Apr 08, 2022 |
|
Shell |
9 |
Cluster-specific pseudo-bulk analysis of 10X single-cell RNA-seq data by connecting Seurat to the VBC RNA-seq … |
Sep 14, 2022 |
|
Python |
3 |
RNA-Seq pipeline |
May 04, 2021 |
|
Python |
22 |
Digital Cell Sorter (DCS): single cell RNA-seq analysis toolkit. Documentation: |
Apr 12, 2024 |
|
Python |
7 |
Cell cycle analysis of single-cell proteomic and transcriptomic data for the FUCCI cell model -- … |
Mar 20, 2023 |
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R |
2 |
Preprocessing of Droplet-based Single-Cell RNA-seq Data |
Sep 24, 2020 |
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HTML |
3 |
Materials for training provision on single-cell RNA-seq |
Apr 13, 2021 |
|
R |
23 |
Single cell RNA-seq analysis for transcriptomic type characterization |
May 31, 2022 |
|
R |
163 |
R package for analyzing single-cell RNA-seq data |
Apr 03, 2023 |
|
Python |
155 |
Differential expression analysis for single-cell RNA-seq data. |
Apr 06, 2023 |
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None |
2 |
Differential expression analysis for single-cell RNA-seq data |
Apr 14, 2021 |
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Jupyter Notebook |
39 |
Dynamic models for single-cell RNA-seq time series. |
Apr 15, 2023 |
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Jupyter Notebook |
28 |
Supervised Adversarial Alignment of Single-Cell RNA-seq Data |
Jul 15, 2022 |