Stars
12
Forks
7
Language
R
Last Updated
Dec 19, 2023
Similar Repos
| Repo | Language | Stars | Description | Updated At |
|---|---|---|---|---|
| C++ | 32 | DNA, Amino Acid and RNA Tests | Sep 27, 2022 | |
| Python | 10 | An amino acid sequence annotator | Feb 24, 2023 | |
| Java | 2 | PDB Amino Acid Sequence Viewer | Oct 25, 2016 | |
| Java | 5 | PDB Amino Acid Sequence Viewer | Jan 03, 2020 | |
| JavaScript | 2 | React App with components for rendering protein, DNA, and RNA sequence logos | May 27, 2023 | |
| C | 74 | A collection of tools for Multiple Alignments of DNA, RNA, Protein Sequence | Mar 16, 2023 | |
| Python | 28 | Python package to plot sequence logos | Apr 25, 2023 | |
| Java | 9 | A dotplot application for DNA/RNA sequence | Dec 14, 2022 | |
| Python | 16 | 🎯 Generate DNA sequences with specified amino acid, codon, and k-mer frequencies | May 14, 2022 | |
| TypeScript | 157 | a JavaScript DNA, RNA, and protein sequence viewer | May 05, 2023 | |
| Perl | 8 | RNA Multiple Sequence Alignment | Nov 28, 2022 | |
| Perl | 2 | RNA Multiple Sequence Alignment | May 20, 2022 | |
| JavaScript | 18 | DNA/RNA/AA sequence manipulation utility functions | Apr 03, 2023 | |
| Julia | 23 | Nucleic and amino acid primitive types | Aug 13, 2022 | |
| Python | 2 | single-cell RNA sequence classification | Sep 30, 2020 | |
| R | 5 | Amino acid modifications for mass spectrometry | Nov 10, 2020 | |
| Python | 20 | Neural networks for amino acid sequences | Aug 08, 2021 | |
| C | 2 | RIsearch: a tool for large-scale RNA–RNA, RNA-DNA, and DNA-DNA interaction prediction | Sep 19, 2022 | |
| C++ | 2 | Searching DNA/RNA sequence databases with PCR and/or probe queries | May 15, 2023 | |
| Python | 21 | Physicochemical properties, indices and descriptors for amino-acid sequences. | Aug 12, 2022 | |
| Python | 46 | Python interface to amino acid properties and IEDB | Sep 02, 2022 | |
| Python | 27 | A tool for accurate prediction of a protein's secondary structure from only it's amino acid … | May 10, 2023 | |
| Jupyter Notebook | 4 | Sequence generation/sequence to sequence learning using amino acid sequences of Corona virus (SARS-COV2) by training … | Apr 28, 2022 | |
| Python | 2 | A transformer network trained to predict end-to-end single sequence protein structure as a set of … | Jan 06, 2024 | |
| Python | 3 | Implementation of multiple bio algorithms for aligning and matching RNA and DNA sequences | Oct 24, 2022 | |
| PostScript | 3 | Cluster amino acid distributions for empirical distribution mixture models | Nov 24, 2021 | |
| JavaScript | 2 | DNA Multiple Sequence Alignment. This is a human computing game for DNA sequence alignment. (made … | Jan 14, 2022 | |
| Python | 12 | ProNA2020: System predicting protein-DNA, protein-RNA and protein-protein binding sites from sequence | Apr 19, 2023 | |
| None | 2 | ProNAhot: Predicting protein-DNA, protein-RNA and protein-protein binding hot-spots from sequence | Jun 14, 2022 | |
| Python | 16 | LucaProt: A novel deep learning framework that incorporates protein amino acid sequence and structure information … | Apr 20, 2023 | |
| Python | 463 | :eye: Python library to plot DNA sequence features (e.g. from Genbank files) | Apr 14, 2023 | |
| Python | 2 | Python libraries for analysing amino acid sequences using Apache Spark | Feb 13, 2022 | |
| Python | 3 | This tool calculates a measure for relative solvent accessible area for single residues or whole … | Mar 21, 2023 | |
| Python | 2 | Map single amino acid variants onto protein structures. Modus operandi: explore relationships between genetic variation … | Oct 12, 2021 | |
| Python | 6 | Scalable tumor phylogeny inference and validation from single-cell RNA or DNA data | Jun 30, 2022 | |
| HTML | 7 | plot Multiple Sequence Alignment(MSA) of Clustal by python package | Jul 25, 2022 | |
| C | 3 | RNA sequence design for a target protein sequence | Sep 06, 2023 | |
| Python | 24 | Amino acid embedding and Convolutional Neural Network for HLA Class I-peptide binding prediction | Aug 08, 2022 | |
| JavaScript | 12 | Javascript package for embedding sequence logos | Apr 14, 2023 | |
| Go | 5 | A nucleotide to amino acid alignment program optimized for virus gene sequences. | Feb 02, 2021 | |
| Python | 27 | LSTM for binary DNA sequence classification | Jun 21, 2022 | |
| Python | 32 | 📈 DNA Sequence Visualization for Humans | Aug 12, 2022 | |
| C | 7 | A toolkit for DNA sequence analysis | Feb 14, 2022 | |
| None | 3 | 📈 DNA Sequence Visualization for Humans | Feb 09, 2023 | |
| C | 2 | Dynamics in sequence space optimisation for RNA sequence design | Sep 22, 2022 | |
| Java | 4 | Sequence Similarity and Identity Calculator (DNA + Protein) | Nov 08, 2021 | |
| Jupyter Notebook | 5 | Exploring amino acid kmers as a substitute for genes in microbial pangenome analysis | Jul 03, 2022 | |
| Python | 3 | Image analysis scripts for conventional DNA and RNA FISH imaging | Jan 05, 2022 | |
| Python | 3 | A Python Script to create and analyze the Amino Acid Network of a protein. | Feb 12, 2022 | |
| Java | 2 | Generates a Profile Hidden Markov Model for protein/DNA sequence analysis using a Multiple Sequence Alignment … | Feb 10, 2021 |