|
|
R |
274 |
Fast Gene Set Enrichment Analysis |
Aug 05, 2022 |
|
|
R |
9 |
Flexible gene set enrichment analysis |
Jul 27, 2022 |
|
|
R |
10 |
Gene Set Enrichment Analysis Made Awesome |
Aug 27, 2020 |
|
|
R |
153 |
Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA) |
Jul 13, 2022 |
|
|
R |
2 |
Paired DGE and DGS analysis for gene set enrichment analysis |
Dec 05, 2022 |
|
|
R |
2 |
Gene Methylation Enrichment Analysis |
Nov 03, 2023 |
|
|
F# |
7 |
Thermodynamically Motivated Enrichment Analysis (TMEA) is a new approach to gene set enrichment analysis. |
Jul 21, 2022 |
|
|
Jupyter Notebook |
2 |
Python interface to Reactome's gene set enrichment analysis service |
May 03, 2022 |
|
|
R |
24 |
Gene set enrichment analysis for single-cell RNAseq data |
May 17, 2023 |
|
|
Scala |
3 |
Gene-List Network Enrichment Analysis |
Nov 25, 2020 |
|
|
HTML |
15 |
🧬 The ✨ new (not-yet-official) ✨ (Gene-) Set Enrichment Analysis. |
Apr 13, 2023 |
|
|
R |
4 |
Gene set enrichment data structures and methods |
Oct 27, 2021 |
|
|
Python |
2 |
Gene ontology enrichment analysis using protein expression. |
Nov 22, 2022 |
|
|
Python |
8 |
Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA) |
Apr 26, 2022 |
|
|
Python |
3 |
Benchmarking enrichment analysis algorithms using transcription factor-gene and drug-gene libraries. |
Jan 10, 2019 |
|
|
Python |
5 |
Method for gene set enrichment using a TWAS framework |
Apr 13, 2022 |
|
|
Python |
2 |
A library for differential expression and gene set enrichment analysis based on hydra and pydantic. |
Aug 15, 2023 |
|
|
R |
9 |
Cell type enrichment analysis using gene signatures and cluster markers |
Aug 12, 2022 |
|
|
R |
6 |
Network-based Gene Set Analysis |
Aug 09, 2022 |
|
|
R |
23 |
GSCALite: Gene set for cancer analysis |
May 06, 2023 |
|
|
R |
3 |
drug set enrichment analysis based on text mining |
Aug 01, 2022 |
|
|
Python |
6 |
A python script and package for gene enrichment analysis, read the docs @ |
Dec 06, 2022 |
|
|
R |
5 |
Flame: A web tool for functional enrichment analysis using multiple gene lists |
Feb 18, 2023 |
|
|
R |
4 |
R package for Time-course Gene Set Analysis |
Feb 20, 2022 |
|
|
R |
2 |
Disease Analysis toolkit for gene set; Computation of |
Nov 17, 2020 |
|
|
Java |
2 |
Kinase Enrichment Analysis |
Dec 02, 2022 |
|
|
Jupyter Notebook |
8 |
A toolbox for ensemble-based multimodal gene-category enrichment analysis of human neuroimaging data |
Jul 03, 2022 |
|
|
MATLAB |
6 |
MATLAB implementation of Gene Set Enrichment Analysis (GSEA) method for finding pathways which can show … |
Sep 07, 2022 |
|
|
R |
2 |
A modified version of the Gene Set Enrichment Analysis (GSEA) with applying a Gaussian Kernel … |
Feb 18, 2022 |
|
|
Python |
9 |
A Snakemake workflow for performing genomic region set and gene set enrichment analyses using LOLA, … |
May 27, 2023 |
|
|
R |
4 |
This is a program that visualize results from enrichment analysis based on Gene Ontology etc. |
Nov 09, 2019 |
|
|
None |
3 |
Analysis of enrichment background |
Feb 24, 2023 |
|
|
R |
2 |
metabolomics pathway enrichment analysis |
Dec 05, 2022 |
|
|
Java |
2 |
Java implementation of RIGER and other gene enrichment methods, useful for RNAi and CRISPR screen … |
Feb 23, 2021 |
|
|
R |
4 |
Detection and quantification of mutation hotspots through mutation set enrichment analysis (MSEA) |
Jan 09, 2023 |
|
|
Java |
28 |
The EnrichmentMap Cytoscape App allows you to visualize the results of gene-set enrichment as a … |
Jan 13, 2023 |
|
|
Perl |
4 |
Gene Rearrangement AnalySiS |
Mar 28, 2022 |
|
|
R |
18 |
Gene network analysis |
Jan 04, 2023 |
|
|
R |
7 |
SUmmarizing Multiple Enrichment analysis Results |
Jun 24, 2021 |
|
|
R |
2 |
A toolkit for enrichment analysis. |
May 25, 2022 |
|
|
R |
2 |
omePath: Omics Pathway Enrichment Analysis |
Apr 07, 2023 |
|
|
Python |
6 |
A software to detect genome-wide miRNA-gene enrichment signal. |
Nov 28, 2019 |
|
|
R |
18 |
R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis |
Apr 14, 2023 |
|
|
R |
3 |
CTGSA : Covariance Thresholding for Gene Set Analysis of Genetic Pathway Data |
Dec 10, 2020 |
|
|
None |
2 |
A survey of enrichment analysis methods |
Jul 13, 2022 |
|
|
R |
142 |
pathfindR: Enrichment Analysis Utilizing Active Subnetworks |
Apr 19, 2023 |
|
|
R |
26 |
binned motif enrichment analysis and visualisation |
Mar 24, 2023 |
|
|
Python |
14 |
Motif Scan and Enrichment Analysis (MoSEA) |
Feb 22, 2022 |
|
|
HTML |
4 |
Function Enrichment analysis and Network construction |
Mar 09, 2023 |
|
|
R |
9 |
Functional Enrichment Analysis and Network Construction |
May 13, 2020 |