|
R |
22 |
Single cell RNA-seq analysis bundle |
Mar 28, 2023 |
|
None |
5 |
The best-practices workflow for single-cell RNA-seq analysis as determined by the community. |
Apr 04, 2022 |
|
Jupyter Notebook |
2 |
single-cell RNA-seq |
Mar 28, 2023 |
|
Python |
3 |
Single Cell RNA-seq Analysis by Topic Modeling |
May 24, 2022 |
|
Python |
4 |
Single-cell RNA-seq data analysis and visualization |
Jun 12, 2022 |
|
TeX |
2 |
Analysis of single cell RNA-seq data course |
Sep 25, 2019 |
|
TeX |
49 |
Analysis of single cell RNA-seq data course |
Apr 23, 2023 |
|
Python |
4 |
Single Cell RNA-Seq analysis toolbox for Python |
Sep 13, 2018 |
|
Python |
7 |
Single Cell RNA-seq Pipeline |
May 18, 2022 |
|
Shell |
2 |
Single Cell RNA-Seq Imputation |
Mar 31, 2021 |
|
Python |
2 |
Single cell RNA-seq tools |
Jul 20, 2022 |
|
Python |
4 |
single-cell RNA-seq clustering |
Jul 27, 2021 |
|
Python |
22 |
Digital Cell Sorter (DCS): single cell RNA-seq analysis toolkit. Documentation: |
Apr 12, 2024 |
|
R |
23 |
Single cell RNA-seq analysis for transcriptomic type characterization |
May 31, 2022 |
|
Python |
155 |
Differential expression analysis for single-cell RNA-seq data. |
Apr 06, 2023 |
|
None |
2 |
Differential expression analysis for single-cell RNA-seq data |
Apr 14, 2021 |
|
HTML |
2 |
Single-cell RNA-seq Analysis of Metastatic Melanoma Tumors |
May 06, 2023 |
|
R |
9 |
Differential expression analysis for single-cell RNA-seq data |
Nov 15, 2022 |
|
R |
114 |
Signature Analysis and Visualization for Single-Cell RNA-seq |
Apr 18, 2023 |
|
R |
30 |
R package for bcbio single-cell RNA-seq analysis. |
Apr 22, 2023 |
|
None |
3 |
Analysis code for lungfish single cell RNA-seq data |
Sep 22, 2023 |
|
HTML |
2 |
Cluster single cell RNA-seq data |
Sep 30, 2020 |
|
R |
3 |
A single-cell RNA-seq pipeline |
Apr 20, 2023 |
|
Rust |
41 |
Single-Cell RNA-seq pseudo-aligner |
Mar 22, 2023 |
|
Java |
6 |
Single-Cell RNA Seq analysis and visualization package for Cytoscape |
Feb 14, 2022 |
|
Python |
13 |
Galaxy container for single cell RNA-Seq tertiary analysis tools |
Aug 07, 2022 |
|
HTML |
5 |
SIB course teaching concepts for single-cell RNA-seq analysis |
Aug 03, 2019 |
|
R |
5 |
R package for for single-cell RNA-seq clustering analysis. |
May 11, 2022 |
|
R |
4 |
Analysis of single-cell RNA-seq data using topic models. |
Mar 24, 2023 |
|
R |
2 |
GCA: Gene Correlation Analysis for Single-cell RNA-seq data |
Jun 06, 2019 |
|
HTML |
16 |
Python package for analysis of multiomic single cell RNA-seq and ATAC-seq. |
Apr 25, 2022 |
|
R |
15 |
IKAP - Identifying K mAjor cell Population groups in single-cell RNA-seq analysis |
Aug 26, 2021 |
|
TeX |
27 |
Repo for Physalia course Analysis of Single Cell RNA-Seq data |
Apr 11, 2022 |
|
HTML |
55 |
STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking) |
Apr 29, 2023 |
|
HTML |
16 |
UNDER DEVELOPMENT: Workflow for single-cell RNA-seq analysis using Seurat |
May 23, 2023 |
|
R |
9 |
Single cell analysis tools for expression from RNA-seq in R |
Feb 10, 2024 |
|
R |
3 |
Single cell RNA-seq analysis of pancreatic islets with drug treatment |
Apr 22, 2024 |
|
R |
8 |
Core utilities for single-cell RNA-seq |
Dec 12, 2021 |
|
R |
342 |
Inferring CNV from Single-Cell RNA-Seq |
Aug 10, 2022 |
|
R |
2 |
Adaptive Visualization for Single-cell RNA-seq |
Apr 07, 2023 |
|
Jupyter Notebook |
2 |
Single cell RNA-seq of human melanocytes |
Sep 23, 2021 |
|
Jupyter Notebook |
63 |
Preprocessing of single-cell RNA-Seq (deprecated) |
Apr 08, 2022 |
|
HTML |
19 |
HSCI/Catalyst Single-cell RNA-Seq Workshop |
Aug 29, 2022 |
|
Jupyter Notebook |
84 |
scDeepCluster for Single Cell RNA-seq data |
Apr 18, 2023 |
|
R |
2 |
single cell RNA-seq results report system |
Aug 08, 2023 |
|
R |
7 |
Single cell RNA-seq and ATAC seq analysis of cardiac progenitor cell transition states and lineage … |
Oct 08, 2021 |
|
R |
7 |
Characterizing and inferring quantitative cell cycle phase in single-cell RNA-seq data analysis |
Feb 15, 2023 |
|
R |
242 |
Table of software for the analysis of single-cell RNA-seq data. |
Aug 13, 2022 |
|
HTML |
3 |
Visualization and analysis of single-cell RNA-seq data by alternative clustering |
May 10, 2022 |
|
R |
3 |
Table of software for the analysis of single-cell RNA-seq data. |
Apr 08, 2022 |