|
Python |
33 |
Phenotype driven gene prioritization for HPO |
Nov 11, 2022 |
|
R |
17 |
Use gene expression to predict phenotype sample information |
Mar 09, 2022 |
|
Perl |
3 |
this repository contains text mined gene-phenotype data |
Dec 03, 2019 |
|
Python |
12 |
Prioritizing Copy Number Variants (CNV) using Phenotype and Gene Functional Similarity |
Sep 20, 2022 |
|
HTML |
2 |
A benchmark of existing gene co-expression estimator on scRNA-seq data. |
Jan 26, 2023 |
|
HTML |
34 |
Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution |
Aug 17, 2022 |
|
Python |
2 |
Python library to work with HPO (Human Phenotype Ontology) terms and their gene/disease associations |
Jan 26, 2022 |
|
Python |
21 |
lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters |
Apr 28, 2023 |
|
Jupyter Notebook |
11 |
Distinguishing between generic and experiment-specific gene expression signals. |
Jul 11, 2022 |
|
R |
2 |
🧬 Tissue-specific gene embeddings trained on GTEx data |
Oct 26, 2022 |
|
Jupyter Notebook |
2 |
Extracting anatomy-specific gene expression in humans from Bgee |
Sep 20, 2023 |
|
Python |
31 |
A pipeline that takes clinical notes from EHRs and generate phenotype terms, then generate ranked … |
Dec 12, 2022 |
|
Python |
3 |
Context specific and dynamic gene regulatory network reconstruction and analysis |
Aug 10, 2022 |
|
Python |
2 |
a framework to generate and validate tissue-specific gene signatures. |
Apr 13, 2023 |
|
Makefile |
56 |
The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology. |
Jul 29, 2022 |
|
Makefile |
6 |
Planarian Phenotype Ontology |
Dec 29, 2021 |
|
Makefile |
3 |
Dicty Phenotype Ontology |
Jan 22, 2022 |
|
Prolog |
2 |
causal phenotype networks |
Mar 12, 2023 |
|
R |
12 |
UKB Phenotype process |
May 21, 2023 |
|
Python |
2 |
Phenotype harmonization pipeline |
Jan 27, 2024 |
|
Julia |
4 |
IDP-ASE: haplotyping and quantifying allele-specific expression at the gene and gene isoform level by hybrid … |
Sep 04, 2021 |
|
C++ |
8 |
🌲 a flexible gene expression simulator with codon-specific translation rates |
Apr 04, 2022 |
|
Jupyter Notebook |
2 |
Software to distinguish between common and experiment-specific gene expression signals |
Nov 30, 2022 |
|
C++ |
22 |
kalman-estimator - a Kalman estimator in C++ |
Mar 01, 2023 |
|
Python |
6 |
Cellular Microscopy Phenotype Ontology |
Nov 05, 2020 |
|
Makefile |
12 |
Fission Yeast Phenotype Ontology |
Jun 03, 2022 |
|
Java |
11 |
Human Phenotype Ontology Workbench |
Sep 01, 2022 |
|
HTML |
2 |
Polygenic EpiStatic Phenotype Simulation |
Jul 05, 2022 |
|
Java |
15 |
phenol: Phenotype ontology library |
Mar 10, 2022 |
|
Makefile |
2 |
kalman-estimator - a Kalman estimator in Ada, sibling of Kalman estimator in C++ |
Oct 01, 2019 |
|
R |
3 |
Gene specific calibrations for CADD scores based on ClinVar, ExAC and SnpEff |
Jan 09, 2022 |
|
Python |
265 |
TensorFlow Estimator |
Aug 03, 2022 |
|
Python |
4 |
Kepler Estimator |
Mar 02, 2023 |
|
Python |
2 |
TensorFlow Estimator |
Jun 23, 2022 |
|
C++ |
2 |
Pose estimator |
Jan 28, 2023 |
|
Go |
3 |
oss-estimator |
Mar 23, 2023 |
|
R |
7 |
FitDevo: accurate inference of single-cell developmental potential using sample-specific gene weight |
May 05, 2023 |
|
Python |
13 |
Interpretable genotype-phenotype landscape modeling |
Jul 21, 2022 |
|
HTML |
41 |
Denoising Autoencoders for Phenotype Stratification |
Oct 31, 2021 |
|
Makefile |
5 |
Pathogen-Host Interaction Phenotype Ontology |
Apr 10, 2023 |
|
Prolog |
2 |
ontologizing phenotype descriptions from ensvar |
Mar 12, 2023 |
|
JavaScript |
7 |
Portable, workflow-based phenotype definitions |
Feb 06, 2023 |
|
R |
5 |
CellNet: network biology-based computational platform to assess establishment of cell type specific gene regulatory networks … |
Nov 27, 2020 |
|
Python |
3 |
LPE Estimator Analysis |
May 07, 2018 |
|
C++ |
2 |
3D quadrotor estimator |
Mar 05, 2023 |
|
Python |
19 |
Prophage Activity Estimator |
Apr 28, 2023 |
|
Go |
2 |
Sourcegraph resource estimator |
Aug 19, 2022 |
|
TeX |
2 |
Generalized Imputation Estimator |
May 13, 2023 |
|
R |
2 |
Maximum Score Estimator |
Jun 24, 2023 |
|
TypeScript |
2 |
bicep cost estimator |
Feb 11, 2024 |