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R |
4 |
single cell lineage reconstruction using paired lineage barcode and gene expression data |
Oct 02, 2023 |
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Python |
3 |
Context specific and dynamic gene regulatory network reconstruction and analysis |
Aug 10, 2022 |
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R |
3 |
Gene-Specific Phenotype EstimatoR |
Jul 04, 2019 |
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JavaScript |
30 |
Similarity networks of biosynthetic gene clusters |
Apr 22, 2023 |
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Perl |
4 |
Gene Rearrangement AnalySiS |
Mar 28, 2022 |
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R |
18 |
Gene network analysis |
Jan 04, 2023 |
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Python |
5 |
Masked language models of biosynthetic gene clusters |
Jul 25, 2022 |
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Python |
2 |
Gene signature similarity analysis |
Jul 31, 2020 |
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Python |
19 |
Gene-flank analysis tool |
Mar 08, 2023 |
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R |
2 |
Gene Methylation Enrichment Analysis |
Nov 03, 2023 |
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Python |
2 |
SQL Lineage Analysis Tool powered by Python |
Feb 02, 2023 |
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Python |
653 |
SQL Lineage Analysis Tool powered by Python |
Apr 28, 2023 |
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Python |
2 |
SQL Lineage Analysis Tool powered by Python |
Mar 29, 2023 |
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C |
10 |
Discovery of conserved gene clusters in multiple genomes |
Apr 12, 2023 |
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Python |
38 |
A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data |
Apr 19, 2023 |
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R |
8 |
tRNA gene regulation downstream analysis |
Nov 06, 2019 |
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R |
274 |
Fast Gene Set Enrichment Analysis |
Aug 05, 2022 |
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R |
9 |
Flexible gene set enrichment analysis |
Jul 27, 2022 |
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Scala |
3 |
Gene-List Network Enrichment Analysis |
Nov 25, 2020 |
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R |
6 |
Network-based Gene Set Analysis |
Aug 09, 2022 |
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R |
3 |
Analysis of gene expression microarray |
Jan 31, 2023 |
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Python |
3 |
CHS gene structure prediction analysis |
Feb 18, 2024 |
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R |
2 |
Agilent gene expression microarray analysis |
May 14, 2023 |
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HTML |
34 |
Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution |
Aug 17, 2022 |
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Java |
2 |
Integrated Analysis of Gene/Protein Lists |
Jul 17, 2021 |
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PHP |
3 |
Automated gene expression analysis using CorEx |
Jul 19, 2022 |
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R |
15 |
Gene Co-expression Network analysis pipeline |
May 02, 2023 |
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R |
4 |
Suite of fusion gene analysis tools |
Dec 03, 2021 |
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R |
2 |
Parameterized fast gene set enrichment analysis. |
Feb 09, 2023 |
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R |
23 |
GSCALite: Gene set for cancer analysis |
May 06, 2023 |
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R |
10 |
Gene Set Enrichment Analysis Made Awesome |
Aug 27, 2020 |
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CSS |
4 |
Gene Expression Omnibus Analysis with Shiny - |
Mar 03, 2020 |
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Python |
3 |
Benchmarking enrichment analysis algorithms using transcription factor-gene and drug-gene libraries. |
Jan 10, 2019 |
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Shell |
3 |
Find enriched functional clusters (pfam/ipr/gene family etc) on chromosomes. |
Dec 06, 2022 |
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Jupyter Notebook |
11 |
Distinguishing between generic and experiment-specific gene expression signals. |
Jul 11, 2022 |
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R |
2 |
🧬 Tissue-specific gene embeddings trained on GTEx data |
Oct 26, 2022 |
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Jupyter Notebook |
2 |
Extracting anatomy-specific gene expression in humans from Bgee |
Sep 20, 2023 |
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R |
22 |
Differential gene expression analysis and pathway analysis of RNAseq data |
Apr 19, 2022 |
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R |
2 |
Paired DGE and DGS analysis for gene set enrichment analysis |
Dec 05, 2022 |
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Go |
182 |
Automated turndown of Kubernetes clusters on specific schedules. |
Aug 22, 2022 |
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Nextflow |
5 |
GENE-SWitCH project RNA-Seq analysis pipeline |
Jun 14, 2022 |
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R |
16 |
SPATA Package for spatial gene expression analysis |
Apr 20, 2023 |
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R |
36 |
A Toolbox for Spatial Gene Expression Analysis |
Apr 24, 2023 |
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R |
3 |
🧬 GENE analysis toolKIT based on R |
Jun 22, 2022 |
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C++ |
3 |
Probabilistic Gene Expression in the Middle Analysis |
Jul 31, 2020 |
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HTML |
25 |
Visual exploratory analysis of gene expression data |
Aug 08, 2022 |
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R |
5 |
single cell Gene co-Expression Network Analysis |
Mar 21, 2023 |
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MATLAB |
3 |
Gene expression analysis of C. Elegans connectome |
Nov 19, 2020 |
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Python |
2 |
Gene ontology enrichment analysis using protein expression. |
Nov 22, 2022 |
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R |
3 |
A Meta-Analysis Approach with Filtering for Identifying Gene-Level Gene-Environment Interactions |
Oct 27, 2022 |