Stars
8
Forks
7
Language
Python
Last Updated
Nov 24, 2022
Similar Repos
| Repo | Language | Stars | Description | Updated At |
|---|---|---|---|---|
| Java | 2 | Genotype Investigator for Genome Wide Analyses | Nov 14, 2022 | |
| Python | 2 | Genome-wide SNP Mapper and Genome Comparison Tool | Oct 12, 2022 | |
| HTML | 2 | Mitochondrial Genome Assembly Assessment Visualization | Jan 31, 2023 | |
| Python | 3 | Genome-wide gene gain/loss mapping tool using DTL(Duplication-Transfer-Loss) reconciliation method | Jun 22, 2022 | |
| JavaScript | 36 | Interactive quality assessment of genome assemblies | Apr 20, 2023 | |
| Python | 2 | Code for the manuscript "Genome-wide investigation of gene-cancer associations for the prediction of novel therapeutic … | Apr 11, 2022 | |
| Python | 4 | Genome-wide detection of positive selection | Jun 23, 2022 | |
| C++ | 2 | Genome-wide Efficient Mixed Model Association | Apr 25, 2019 | |
| R | 2 | Construct genome wide gene regulatory networks | Apr 28, 2023 | |
| Python | 2 | Genome-wide contact analysis using sklearn | Sep 29, 2022 | |
| R | 33 | Genome-wide association studies tutorial 🧬 | May 24, 2023 | |
| C | 21 | C++ package for analysing CRISPR off targets | Apr 07, 2023 | |
| Python | 10 | Workflow for detecting genome-wide horizontal gene transfers | Aug 09, 2021 | |
| Python | 29 | Toolkit for genome-wide analysis of tandem repeats | May 11, 2023 | |
| Python | 2 | Genome assembly taxonomy summary and assessment tool. | Mar 13, 2023 | |
| R | 64 | Genome wide orthology inference and dNdS estimation | Apr 26, 2023 | |
| R | 2 | Explore Results from Genome-Wide Association Analyses | Dec 10, 2023 | |
| Nextflow | 9 | UNDER CONSTRUCTION: A pipeline for Genome Wide Association Studies | Aug 04, 2022 | |
| Julia | 12 | Genome-wide association studies (GWAS) for ordered categorical phenotypes | Dec 20, 2021 | |
| Python | 17 | Genome-wide scan for balancing selection using beta statistic | May 03, 2023 | |
| Perl | 5 | Direct genome-wide identification of G-quadruplex structures by whole-genome resequencing | May 20, 2022 | |
| Python | 11 | off-targeting assessment of Cas9 gRNAs | Jan 13, 2023 | |
| None | 6 | Assessment of genome assemblies through various evaluation methods | Jan 23, 2023 | |
| Python | 3 | Method for performing genome-wide association like studies on neighborhoods identified on biological networks relevant for … | Jul 11, 2022 | |
| Python | 2 | Automated Quality Assessment for Compressed Vibrotactile Signals Using Multi-Method Assessment Fusion | Jan 09, 2024 | |
| Julia | 5 | This package performs standard Genome-wide Association Studies. | Nov 23, 2021 | |
| Python | 395 | Fast genome-wide functional annotation through orthology assignment | Oct 17, 2022 | |
| Python | 5 | Genome-wide investigation of non-canonical splice sites | Jun 05, 2022 | |
| Perl | 4 | Genome-wide multi-process chromosome-level SSR search | Apr 08, 2023 | |
| Python | 3 | scripts associated with the genome-wide analysis of MYBs in the banana genome | Jun 05, 2022 | |
| Python | 4 | tools for the processing of genome-wide bisulfite sequencing data | Aug 07, 2018 | |
| JavaScript | 2 | Higher Order Method Problems Assessment Prep | Feb 06, 2023 | |
| R | 3 | DeepGenomeScan: A Deep Learning Approach for Whole Genome Scan (WGS) and Genome-wide Association Studies (GWAS) | May 15, 2022 | |
| C++ | 130 | regenie is a C++ program for whole genome regression modelling of large genome-wide association studies. | May 08, 2023 | |
| Python | 4 | Plant GWA (genome-wide analysis), GEP (genomic-enable prediction) and GE (genome evolution) toolset | Sep 03, 2021 | |
| Nextflow | 4 | NYU Langone Genome PACT (Genome Profiling of Actionable Cancer Targets) targeted exome sequencing analysis pipeline. | Feb 06, 2023 | |
| C++ | 7 | Sampling and manipulating genome-wide ancestral recombination graphs (ARGs) | Jan 31, 2022 | |
| R | 2 | Genome-Wide RNA Degradation Analysis Using BRIC-Seq Data | Apr 10, 2021 | |
| R | 2 | Cancer variant data from genome-wide association studies (GWAS) | Dec 14, 2022 | |
| R | 30 | R package to perform Bayesian Genome-Wide Association Studies | May 12, 2023 | |
| Python | 32 | Coda: a convolutional denoising algorithm for genome-wide ChIP-seq data | Mar 01, 2023 | |
| Python | 16 | A Python package for testing evolutionary hypotheses in genome-wide approaches. | Oct 03, 2022 | |
| Python | 6 | A software to detect genome-wide miRNA-gene enrichment signal. | Nov 28, 2019 | |
| Python | 5 | Transformer-based model to predict genome-wide chromosome spatial position | Dec 15, 2023 | |
| HTML | 31 | An ultrafast tool for genome-wide survey of microsatellites and primer design | Mar 29, 2023 | |
| R | 4 | Tool for genome wide association studies with Bayesian inference and statistical learning | Feb 18, 2022 | |
| JavaScript | 9 | Providing the method $off for $rootScope in Angular.js | Nov 28, 2017 | |
| Jupyter Notebook | 2 | repository for Unbiased Gradient Boosting Decision Tree with Unbiased Feature Importance | May 19, 2023 | |
| R | 4 | Genome-Wide scale Machine Learning for gene expression prediction. Developed on R language. | Apr 21, 2022 | |
| Jupyter Notebook | 5 | Code and analysis for genome-wide analysis of eSTRs in the GTEx cohort | Sep 10, 2022 |