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Python |
2 |
A PyTorch Basecaller for Oxford Nanopore Reads |
May 06, 2022 |
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Python |
331 |
A PyTorch Basecaller for Oxford Nanopore Reads |
Apr 27, 2023 |
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C++ |
145 |
A LibTorch Basecaller for Oxford Nanopore Reads |
Apr 27, 2023 |
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C |
96 |
Flip-flop basecaller for Oxford Nanopore reads |
Jan 28, 2023 |
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C++ |
7 |
A LibTorch Basecaller for Oxford Nanopore Reads |
Feb 21, 2023 |
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C++ |
70 |
An Oxford Nanopore Basecaller |
Mar 22, 2023 |
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Python |
115 |
A basecaller for Oxford Nanopore Technologies' sequencers |
Apr 11, 2023 |
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None |
3 |
Dockerfile for the Albacore basecaller from Oxford Nanopore |
Jul 19, 2017 |
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Shell |
13 |
Splitting and accelerating the Oxford Nanopore basecaller guppy using CPU with the SLURM job scheduler |
May 05, 2023 |
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C++ |
249 |
adapter trimmer for Oxford Nanopore reads |
Apr 23, 2023 |
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C++ |
261 |
De novo assembly from Oxford Nanopore reads. |
Jul 28, 2022 |
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Python |
108 |
Training models for basecalling Oxford Nanopore reads |
Jan 28, 2023 |
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C++ |
29 |
De novo assembly from Oxford Nanopore reads. |
Apr 01, 2023 |
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Python |
121 |
a signal-level demultiplexer for Oxford Nanopore reads |
Mar 08, 2023 |
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Python |
2 |
A script for sorting, assessing and converting Oxford Nanopore reads |
Nov 26, 2017 |
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Python |
24 |
A simple tool for extracting reads from Oxford Nanopore fast5 files |
Aug 05, 2022 |
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Python |
59 |
A short analysis of Oxford Nanopore consensus accuracy for bacterial genome assemblies |
Jan 25, 2023 |
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Python |
14 |
Strip reads from Oxford Nanopore FAST5 files if they meet certain criteria |
Jan 14, 2022 |
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Python |
14 |
NanoSim-H: a simulator of Oxford Nanopore reads; a fork of NanoSim. |
Apr 12, 2023 |
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C |
45 |
Pauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads. |
May 24, 2023 |
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Python |
4 |
Pipeline to assemble oxford nanopore long sequencing reads and perform variant calling with long and … |
Apr 06, 2023 |
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Python |
31 |
A snakemake pipeline to assembly, polishing, correction and quality check from Oxford nanopore reads. |
Apr 03, 2023 |
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Python |
74 |
qcat is a Python command-line tool for demultiplexing Oxford Nanopore reads from FASTQ files. |
Aug 29, 2022 |
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Python |
92 |
Detection of RNA modifications from Oxford Nanopore direct RNA sequencing reads (Liu*, Begik* et al., … |
Apr 26, 2023 |
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Perl |
14 |
NaS is a hybrid approach developped to take advantage of data generated using MinION device. … |
Apr 09, 2020 |
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Python |
173 |
Megalodon is a research command line tool to extract high accuracy modified base and sequence … |
Apr 14, 2023 |
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Python |
49 |
Introduction Parkinson’s Disease is the second most prevalent neurodegenerative disorder after Alzheimer’s, affecting more than … |
Apr 19, 2023 |
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Python |
171 |
using Neural Networks (SSD) on Tensorflow. This repo documents steps and scripts used to train … |
Sep 06, 2022 |
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Python |
14 |
According to all known laws of aviation, there is no way that a bee should … |
Apr 13, 2023 |
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JavaScript |
47 |
CREDITS SEQUENCE NEWSPAPER HEADLINE MONTAGE: HEADLINES flash before us, displaying their accompanying photographs. "UBERMAN - … |
Sep 06, 2022 |