|
|
C++ |
18 |
Aligner for sequencing data |
Sep 20, 2022 |
|
|
C++ |
3 |
An variance-tolerant aligner for next-generation sequencing |
Sep 20, 2023 |
|
|
C++ |
270 |
Scalable Nucleotide Alignment Program -- a fast and accurate read aligner for high-throughput sequencing data |
Apr 17, 2023 |
|
|
C++ |
65 |
LAMBDA – the Local Aligner for Massive Biological DatA |
Jan 02, 2023 |
|
|
C++ |
13 |
Aligner for large scale serial section image data |
Jan 18, 2023 |
|
|
GDScript |
2 |
sequencing data analysis |
Aug 08, 2023 |
|
|
Python |
9 |
Deduplication for cfDNA sequencing data |
Jun 18, 2020 |
|
|
Python |
3 |
Various scripts for sequencing data analysis |
Jan 03, 2023 |
|
|
C++ |
3 |
Allele screening for NextGen sequencing data. |
Dec 21, 2013 |
|
|
Java |
7 |
Analysis tool for Nanopore sequencing data |
Oct 21, 2022 |
|
|
Nextflow |
5 |
Basic workflow for nanopore sequencing data |
Apr 24, 2023 |
|
|
Java |
31 |
Analysis tool for Nanopore sequencing data |
Oct 18, 2021 |
|
|
R |
2 |
Data Processing Pipeline for PRISM Sequencing |
Nov 28, 2023 |
|
|
Python |
2 |
CPD sequencing data analysis |
Jul 27, 2023 |
|
|
Python |
5 |
A pipeline for long-read sequencing data. |
Jun 09, 2019 |
|
|
Python |
2 |
Command line utilities for RNA-sequencing data |
Jun 26, 2022 |
|
|
R |
20 |
Expanded STR algorithm for Illumina sequencing data |
Apr 28, 2022 |
|
|
Python |
300 |
Plotting scripts for long read sequencing data |
May 14, 2023 |
|
|
Python |
51 |
Quality control tools for nanopore sequencing data |
May 15, 2023 |
|
|
Python |
4 |
Heuristic SNP caller for pooled sequencing data |
Feb 26, 2023 |
|
|
Nextflow |
4 |
Nextflow pipeline for preprocessing RNA sequencing data. |
Nov 22, 2022 |
|
|
Rust |
4 |
Spliced aligner. |
Nov 25, 2020 |
|
|
C++ |
3 |
FAST Aligner |
Jan 05, 2021 |
|
|
VBA |
3 |
Bitext aligner |
Mar 01, 2022 |
|
|
C |
6 |
Fast sequencing data quality metrics |
May 21, 2024 |
|
|
Jupyter Notebook |
7 |
🧬 Analyzing compression algorithms for genomic sequencing data |
May 13, 2022 |
|
|
Nextflow |
11 |
UNDER CONSTRUCTION: Demultiplexing pipeline for Illumina sequencing data |
Jul 14, 2022 |
|
|
C |
631 |
C library for high-throughput sequencing data formats |
Aug 11, 2022 |
|
|
Shell |
32 |
A simplified pipeline for ctDNA sequencing data analysis |
Apr 23, 2023 |
|
|
JavaScript |
2 |
A tool for QCing next gen sequencing data. |
Apr 29, 2014 |
|
|
Python |
3 |
Data processing pipeline for HIV next-gen sequencing |
Jul 03, 2021 |
|
|
R |
6 |
Probabilistic outlier identification for bulk RNA sequencing data |
Nov 02, 2022 |
|
|
Shell |
2 |
16S rRNA sequencing data for the HMP2 project |
Oct 06, 2020 |
|
|
Python |
60 |
Variant calling tool for long-read sequencing data |
May 02, 2023 |
|
|
C |
5 |
C library for high-throughput sequencing data formats |
Apr 05, 2023 |
|
|
C |
3 |
C library for high-throughput sequencing data formats |
Jul 18, 2019 |
|
|
Python |
6 |
Python pipeline for analyzing INSeq Insertion Sequencing data |
May 16, 2022 |
|
|
Common Workflow Language |
4 |
CWL toolkit for single-cell sequencing data analysis |
Jan 22, 2023 |
|
|
C |
4 |
C library for high-throughput sequencing data formats |
Jan 07, 2022 |
|
|
R |
4 |
Deep Read-level Error Model for Sequencing data |
Jul 05, 2023 |
|
|
C |
10 |
Rust wrapper for STAR aligner |
Feb 19, 2023 |
|
|
R |
4 |
Analysis of RNA epitranscriptome sequencing data with affinity-based shotgun sequencing approach |
Jul 03, 2022 |
|
|
Java |
2 |
Evaluating next generation sequencing alignment data |
Jul 13, 2021 |
|
|
R |
51 |
fastqcr: Quality Control of Sequencing Data |
Apr 22, 2022 |
|
|
C++ |
8 |
Imputation of single cell sequencing data |
Apr 21, 2023 |
|
|
Rust |
2 |
Quantitative genetics using pool sequencing data |
Apr 10, 2023 |
|
|
Python |
9 |
Utilities to deal with sequencing data |
Mar 07, 2022 |
|
|
Python |
2 |
Single-cell RNA Sequencing Data Analysis |
Jul 14, 2023 |
|
|
C |
1305 |
RNA-seq aligner |
Aug 17, 2022 |
|
|
Python |
11 |
gentle forced aligner |
Nov 21, 2022 |