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C |
2 |
tools for microbiome data analysis |
Aug 09, 2022 |
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Julia |
41 |
For analysis of microbiome and microbial community data |
Jun 22, 2022 |
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HTML |
2 |
Microbiome Diversity Inspector - A tool for visual analysis of microbiome data. |
Jun 11, 2022 |
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CSS |
2 |
Repository for the microbiome analysis |
Sep 07, 2023 |
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None |
3 |
div-utils: tools for microbiome data analysis |
Jul 21, 2020 |
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R |
3 |
Microbiome analysis |
Dec 08, 2020 |
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R |
23 |
Microbiome analysis |
Jul 28, 2022 |
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R |
3 |
Codes and Data corresponding to the meta-analysis investigating age-gut microbiome interactions in seven major microbiome … |
Apr 07, 2023 |
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HTML |
5 |
scripts for microbiome analysis |
Nov 12, 2022 |
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R |
4 |
Microbiome Analysis Plotting and Visualization |
Dec 31, 2021 |
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JavaScript |
38 |
A fast and scalable phylogenetic tree viewer for microbiome data analysis |
Apr 21, 2023 |
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R |
19 |
Analysis framework for integrating gut microbiome and host gene expression data |
May 09, 2023 |
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TeX |
29 |
Orchestrating Microbiome Analysis |
Jul 21, 2022 |
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R |
3 |
Shiny app for microbiome analysis and visualization |
Dec 15, 2022 |
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Shell |
2 |
Data and analysis script for the workshop at the Summer School "Frontiers in Microbiome Research" |
Feb 03, 2023 |
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Jupyter Notebook |
7 |
An analysis of the tetrapod microbiome |
Jul 25, 2022 |
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HTML |
9 |
Reproducible workflows for the data analysis of "Baseline" project |
Feb 14, 2022 |
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Common Workflow Language |
3 |
Standardized workflows for AMP-AD data processing and analysis |
Mar 03, 2022 |
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R |
3 |
A microbiome analysis toolkit for R |
Jul 20, 2022 |
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R |
3 |
Microbiome analysis of the NYC-HANES study |
Sep 30, 2022 |
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R |
20 |
Code for simulations and analysis for "Latent Variable Modeling for the Microbiome." |
Feb 23, 2022 |
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None |
5 |
Reproducible and scalable data analysis workflows with targets |
Apr 22, 2021 |
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Python |
25 |
data analysis functions |
Mar 18, 2022 |
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None |
109 |
Data Analysis Workflows & Reproducibility Learning Resources |
Feb 02, 2023 |
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None |
4 |
Microbiome Data Simulator |
May 17, 2023 |
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Python |
19 |
Bayesian Inferential Regression for Differential Microbiome Analysis |
Feb 24, 2023 |
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R |
45 |
R shiny app for interactive microbiome analysis |
Mar 28, 2023 |
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Makefile |
5 |
The workshop of microbiome datasets analysis using MicrobiotaProcess |
Apr 18, 2022 |
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Python |
319 |
Customizable workflows based on snakemake and python for the analysis of NGS data |
Apr 05, 2023 |
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R |
8 |
Do microbiome analysis with dada2 and phyloseq object |
Jun 02, 2022 |
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R |
2 |
Graphical models for microbiome data |
Aug 10, 2022 |
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Shell |
27 |
Pipeline & Reproducible analysis examples for amplicon and metagenome in microbiome |
Feb 23, 2023 |
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Jupyter Notebook |
2 |
analysis code for BayeTime manuscript on simulations and microbiome applications |
Jul 13, 2022 |
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Python |
6 |
Onlyfans Data Analysis Functions |
Jun 29, 2022 |
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R |
5 |
Functions for the analysis, standardization, and automation of ecological site data |
Mar 07, 2023 |
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Python |
3 |
Utility functions for workflows. |
Mar 12, 2023 |
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Python |
49 |
Vanilla regression methods for microbiome differential abundance analysis |
Apr 14, 2023 |
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R |
22 |
A shiny package for microbiome functional enrichment analysis |
Jun 15, 2022 |
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R |
5 |
microbiome data simulation package |
Aug 16, 2022 |
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Python |
84 |
:snake: Snakefiles for common RNA-seq data analysis workflows. |
Mar 13, 2023 |
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Python |
2 |
SingleTop Analysis with Public CMS Data using luigi analysis workflows |
Nov 24, 2021 |
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R |
105 |
Curated Metagenomic Data of the Human Microbiome |
Mar 29, 2023 |
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Python |
4 |
Effect size calculations for microbiome data |
Apr 28, 2022 |
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Python |
10 |
Case-control matching for microbiome data |
Mar 27, 2023 |
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R |
13 |
A workshop on microbiome analysis using Bioconductor |
Jul 30, 2022 |
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Python |
10 |
Load data in BigQuery using Cloud Workflows, Firestore and Cloud Functions. |
Jun 21, 2022 |
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R |
2 |
Functions for road traffic accident data analysis. |
May 31, 2023 |
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Jupyter Notebook |
3 |
A python toolkit for the predictive analysis of infection-prone microbiome pathways |
Oct 30, 2019 |
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None |
30 |
Intro to workflows for efficient automated data analysis, using snakemake. |
Sep 29, 2022 |
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Python |
5 |
Intro to workflows for efficient automated data analysis, using snakemake. |
Aug 08, 2022 |