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|
Python |
16 |
Reproducible workflow for SARS-CoV-2 recombinant sequence detection. |
Mar 06, 2023 |
|
|
None |
9 |
SARS-CoV-2 genomics |
Jan 06, 2022 |
|
|
None |
2 |
SARS-CoV-2 datahub |
Jul 06, 2021 |
|
|
Nextflow |
5 |
Fast trees for SARS-CoV-2 |
Jun 15, 2022 |
|
|
Python |
2248 |
Reverse engineering SARS-CoV-2 |
Aug 19, 2022 |
|
|
None |
2 |
Reverse engineering SARS-CoV-2 |
Jul 23, 2022 |
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Dart |
3 |
Another SARS-CoV-2 Tracker. |
Feb 15, 2022 |
|
|
Jupyter Notebook |
36 |
International SARS-CoV-2 surveillance |
Apr 11, 2023 |
|
|
None |
2 |
Reverse engineering SARS-CoV-2 |
Sep 26, 2022 |
|
|
None |
2 |
SARS-CoV-2 datasets for testing pipelines |
May 15, 2023 |
|
|
Python |
8 |
CoVigator - Monitoring SARS-CoV-2 mutations |
Jun 30, 2022 |
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|
Perl |
12 |
Bioinformatics analysis of SARS-CoV-2 |
Apr 04, 2022 |
|
|
Python |
10 |
Coronavirus (SARS-Cov-2) sequencing analysis |
Apr 19, 2022 |
|
|
None |
8 |
SARS-CoV-2 genome data analysis |
Mar 30, 2023 |
|
|
HTML |
4 |
Mutational spectrum of SARS-CoV-2 |
Apr 25, 2023 |
|
|
None |
2 |
Druggability analysis of SARS-CoV-2 |
May 07, 2020 |
|
|
Python |
2 |
SARS-CoV-2(Coronavirus) RNA visualization |
Jul 01, 2023 |
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|
R |
2 |
SARS-CoV-2 severity monitoring project |
Feb 22, 2023 |
|
|
HTML |
2 |
Identities among SARS-CoV-2 variants and SARS-related coronaviruses |
Feb 01, 2023 |
|
|
Python |
1296 |
Nextstrain build for novel coronavirus SARS-CoV-2 |
Aug 17, 2022 |
|
|
Python |
40 |
SARS-Cov-2 Recombinant Finder for fasta sequences |
Aug 03, 2022 |
|
|
R |
2 |
Bioinformatic pipeline for SARS-CoV-2 sequence analysis |
Sep 18, 2023 |
|
|
None |
2 |
SARS-CoV-2 Peptide Vaccine, Gen 12 |
Apr 30, 2022 |
|
|
HTML |
14 |
PiGx SARS-CoV-2 wastewater sequencing pipeline |
Aug 04, 2022 |
|
|
Python |
20 |
ARTIC SARS-CoV-2 workflow and reporting |
Jun 24, 2022 |
|
|
Jupyter Notebook |
41 |
Pyro models of SARS-CoV-2 variants |
Aug 09, 2022 |
|
|
Python |
2 |
Interactive visualization of SARS-CoV-2 variants |
Jan 11, 2021 |
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|
Jupyter Notebook |
2 |
SARS-CoV-2 RBD antibody escape calculator |
May 17, 2023 |
|
|
Shell |
7 |
BEAR: viral diagnostic analysis pipeline for SARS-CoV-2 |
Jul 13, 2022 |
|
|
None |
2 |
SARS-CoV-2 resources for sequencing and genomic analysis |
Dec 09, 2021 |
|
|
None |
2 |
Information for RGTM 10169 (SARS-CoV-2 Synthetic RNA) |
Aug 04, 2021 |
|
|
CSS |
4 |
Monitor of SARS-CoV-2 variants and mutations |
Dec 26, 2021 |
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|
TypeScript |
4 |
SARS-CoV-2 BioNTech/Pfizer vaccine as MIDI |
Dec 26, 2021 |
|
|
Python |
4 |
SARS-CoV-2 analysis using PacBio long reads |
Oct 05, 2021 |
|
|
Python |
13 |
Daily analyses of genomic SARS-CoV-2 data |
Jun 07, 2022 |
|
|
Swift |
14 |
A SARS-CoV-2 Mutation Pattern Query Tool |
May 27, 2022 |
|
|
None |
2 |
Analysis of SARS-CoV-2 FASTQs from PRJCA008874 |
Apr 14, 2022 |
|
|
C++ |
2 |
Agent-Based Model of SARS-CoV-2 transmission |
Feb 28, 2022 |
|
|
None |
3 |
Genomic Epidemiology of SARS-CoV-2 in Pakistan |
Apr 12, 2022 |
|
|
None |
3 |
Informal summaries of notable SARS-CoV-2 lineages |
Aug 12, 2022 |
|
|
R |
5 |
Modeling the SARS-CoV-2 epidemic in Switzerland |
Jan 19, 2021 |
|
|
Jupyter Notebook |
5 |
pseudotyping lentiviral virions with SARS-CoV-2 Spike |
Jan 07, 2023 |
|
|
None |
2 |
Analysis of SARS-CoV-2 FASTQs from PRJNA698267 |
Jun 05, 2023 |
|
|
None |
2 |
SARS-CoV-2_Mpro_structures. Provisional Paper Title "Identification of key interactions between SARS-CoV-2 Main Protease and inhibitor drug … |
Sep 25, 2020 |
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|
R |
2 |
A collection of scripts for the detection and visualisation of recombinants from SARS-CoV-2 sequence data. |
May 19, 2022 |
|
|
HTML |
2 |
automated benchmarking of recombination detection methods |
Dec 19, 2022 |
|
|
R |
9 |
Collection of R scripts for SARS-CoV-2 (variant) analyses |
Mar 11, 2023 |
|
|
Nextflow |
20 |
Bioinformatics pipeline for SARS-CoV-2 sequencing at CZ Biohub |
Jul 15, 2022 |
|
|
Python |
20 |
Collection of scripts for automated SARS-CoV-2 genome surveillance. |
Aug 13, 2022 |
|
|
Python |
3 |
A Snakemake workflow for large-scale SARS-CoV-2 analyses. |
Mar 23, 2022 |