|
|
Python |
5 |
bacterial genome assembly |
Aug 30, 2022 |
|
|
Nextflow |
2 |
Only The Best (Genome Assembly Tools) |
Jul 02, 2022 |
|
|
None |
2 |
CCGP Repository for the genome assembly working group. |
Feb 07, 2022 |
|
|
Python |
3 |
Bacterial genome assembly pipeline |
Mar 02, 2022 |
|
|
AMPL |
303 |
Genome assembly evaluation tool |
Apr 24, 2023 |
|
|
None |
2 |
Organelle Genome Assembly Gallery |
Dec 14, 2021 |
|
|
Perl |
5 |
Tools for updating a genome assembly |
Dec 14, 2021 |
|
|
Python |
12 |
An extensible framework for genome assembly. |
Nov 29, 2022 |
|
|
Java |
3 |
Parallel genome assembly using Hyracks |
Jul 29, 2020 |
|
|
Python |
6 |
Diploid genome assembly analysis tools |
Oct 12, 2022 |
|
|
HTML |
2 |
Mitochondrial Genome Assembly Assessment Visualization |
Jan 31, 2023 |
|
|
Shell |
8 |
Pipelines for Drosophila genome assembly and analysis |
Dec 14, 2021 |
|
|
Python |
11 |
MineYourSymbiont : Targetted genome assembly for metagenomics pipeline. |
Nov 09, 2021 |
|
|
JavaScript |
22 |
Visualization tool for (meta)genome assembly graphs |
Sep 25, 2022 |
|
|
Nextflow |
4 |
[WIP] Evaluate outcomes from genome editing experiments |
Jul 14, 2022 |
|
|
Perl |
7 |
Genome assembly/prediction/annotation pipeline for the Linux command line |
Jul 01, 2021 |
|
|
Python |
5 |
viral-ngs: genome assembly and scaffolding |
Mar 23, 2021 |
|
|
Python |
2 |
Genome Assembly Evaluation, Metrics and Reporting |
Sep 28, 2021 |
|
|
Perl |
160 |
Genome Assembly and Annotation Service code |
Aug 17, 2022 |
|
|
Python |
7 |
scripts associated with yam genome assembly |
Jul 10, 2022 |
|
|
Julia |
2 |
Lolium rigidum genome assembly and annotation |
Jan 23, 2023 |
|
|
Assembly |
2 |
Simple program in Assembly x86 [Nasm/Masm] |
Oct 08, 2022 |
|
|
Perl |
23 |
Assembly based core genome SNP alignments for bacteria |
Apr 12, 2023 |
|
|
Shell |
2 |
Viral genome assembly pipeline for WGS using ONT |
Jan 27, 2023 |
|
|
Python |
9 |
An efficient assembly tool for plant mitochondrial genome |
Sep 29, 2023 |
|
|
R |
8 |
a simple R interface to the igv, a java program for viewing genome tracks |
Feb 02, 2022 |
|
|
HTML |
6 |
Scaffolding a genome sequence assembly using ABySS |
Sep 10, 2021 |
|
|
Python |
3 |
Assign chromosome names to a genome assembly |
Nov 06, 2022 |
|
|
Perl |
21 |
🍶Genome assembly with short sequence reads |
Jul 23, 2022 |
|
|
Python |
66 |
🔗Genome assembly scaffolder using minimizer graphs |
Jul 22, 2022 |
|
|
Python |
2 |
Genome assembly taxonomy summary and assessment tool. |
Mar 13, 2023 |
|
|
Python |
201 |
Organelle Genome Assembly Toolkit (Chloroplast/Mitocondrial/ITS) |
May 24, 2023 |
|
|
Python |
2 |
De novo Long-read Genome Assembly Pipeline |
Mar 07, 2024 |
|
|
Assembly |
3 |
A simple calculator program made with assembly language |
Aug 02, 2022 |
|
|
Shell |
2 |
Get the most heterozygous region from a diploid genome assembly |
Apr 06, 2020 |
|
|
Assembly |
2 |
Simple C program compiled to assembly for the ARM Cortex-M0 for tracing the execution. |
Jul 12, 2023 |
|
|
C++ |
3 |
A simple program to generate a high-entropy random genome |
Dec 15, 2021 |
|
|
Python |
10 |
Genome assembly soft-masking using Red (REpeat Detector) |
Mar 30, 2022 |
|
|
C++ |
54 |
✏️ultra fast and scalable genome assembly polishing |
May 23, 2022 |
|
|
None |
2 |
Genome assembly - From theory to practice (and back) |
May 30, 2020 |
|
|
Python |
3 |
Tools to correct genome assembly using NGS data |
Jan 18, 2023 |
|
|
Python |
31 |
A tool for evaluate long-read de novo assembly results |
Mar 29, 2023 |
|
|
Python |
7 |
Use hifi to assembly the Sol genome, and dissecting Sol evo |
May 17, 2023 |
|
|
Python |
319 |
Tools for fast and flexible genome assembly scaffolding and improvement |
Apr 25, 2023 |
|
|
Python |
2 |
Character-level language model for draft genome assembly gap-filling |
Feb 12, 2022 |
|
|
None |
2 |
QC and filtering of genome skims, followed by organelle assembly and/or genome analysis |
Apr 18, 2024 |
|
|
Assembly |
10 |
Paint program for the Famicom, written in 6502 assembly |
Mar 16, 2022 |
|
|
Python |
2 |
scripts associated with the Nd-1 genome assembly based on PacBio data |
Oct 07, 2019 |
|
|
Assembly |
5 |
A simple ‘Hello World’ program written in an Assembly Language. |
Mar 14, 2022 |
|
|
Python |
3 |
Genome assembly gap long read support and reassembly tool |
Sep 23, 2022 |