Stars
2
Forks
3
Language
Python
Last Updated
May 19, 2021
Similar Repos
Repo | Language | Stars | Description | Updated At |
---|---|---|---|---|
C++ | 10 | Single-cell analysis with non-negative matrix factorization | May 10, 2023 | |
HTML | 2 | Code and example data for running Consensus Non-negative Matrix Factorization on single-cell RNA-Seq data | Jan 28, 2023 | |
None | 2 | Code and example data for running Consensus Non-negative Matrix Factorization on single-cell RNA-Seq data | Dec 09, 2021 | |
R | 41 | Inference of cell-cell communication from single-cell RNAseq data | Apr 06, 2023 | |
R | 31 | simpler single cell RNAseq data clustering | Dec 14, 2022 | |
R | 2 | simpler single cell RNAseq data Visualization | Jul 13, 2022 | |
R | 142 | R package for modeling single cell UMI expression data using regularized negative binomial regression | Jul 28, 2022 | |
JavaScript | 3 | Non-negative Matrix Factorization (NMF) | Jul 19, 2022 | |
Jupyter Notebook | 4 | Bayesian Non-negative Matrix Factorization | Apr 03, 2023 | |
Python | 29 | BraCeR - reconstruction of B cell receptor sequences from single-cell RNAseq data | Sep 18, 2022 | |
Python | 110 | TraCeR - reconstruction of T cell receptor sequences from single-cell RNAseq data | May 10, 2023 | |
Python | 5 | orthogonal projective non-negative matrix factorization | Mar 24, 2023 | |
Python | 6 | Transform-Invariant Non-Negative Matrix Factorization | Jul 01, 2022 | |
Python | 29 | Integrative orthogonal non-negative matrix factorization | Apr 11, 2023 | |
Python | 18 | Co-regularized Non-negative Matrix Factorization | Jan 04, 2023 | |
Python | 12 | wNMF: Weighted Non-Negative Matrix Factorization | May 25, 2023 | |
C++ | 18 | Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data | Mar 23, 2023 | |
MATLAB | 2 | A data clustering method based on non-negative matrix factorization | May 14, 2021 | |
Jupyter Notebook | 3 | Non Negative Matrix Factorization for Topic modelling | Nov 19, 2021 | |
Jupyter Notebook | 2 | Python implementation of Non-negative Matrix Factorization | Sep 26, 2020 | |
Python | 35 | Non-negative Matrix Factorization (NMF) Tensorflow Implementation | Dec 14, 2021 | |
Jupyter Notebook | 36 | identifying disease critical cell types and programs from single cell RNAseq | Jun 01, 2023 | |
Nextflow | 59 | A single-cell RNAseq pipeline for 10X genomics data | Jul 27, 2022 | |
R | 24 | Gene set enrichment analysis for single-cell RNAseq data | May 17, 2023 | |
Dockerfile | 2 | An environment for single-cell RNAseq | Feb 13, 2023 | |
Python | 2 | classification of single cell RNAseq results | Jan 29, 2022 | |
Python | 3 | single-cell RNAseq ATACseq processing pipeline | Sep 19, 2021 | |
Jupyter Notebook | 2 | From scratch Python implementation of the Non-Negative Matrix Factorization algorithm. | Nov 20, 2022 | |
Matlab | 9 | Multi-layer non-negative matrix factorization MATLAB implementation. | Dec 13, 2019 | |
Jupyter Notebook | 11 | Topic Modeling with Non-Negative Matrix Factorization (NMF) | Aug 31, 2022 | |
Python | 261 | Dynamic Topic Modeling via Non-negative Matrix Factorization | Sep 24, 2022 | |
Julia | 78 | A Julia package for non-negative matrix factorization | Jun 07, 2022 | |
Python | 179 | A pytorch package for non-negative matrix factorization. | Apr 20, 2023 | |
JavaScript | 3 | Implementation of Non-negative Matrix Factorization in Javascript | Jun 29, 2017 | |
Python | 4 | Tool for group biology estimation in single-cell RNAseq data | Dec 18, 2022 | |
Jupyter Notebook | 3 | Non-negative Matrix Factorization (NMF) Application in Topic Modeling. | Aug 24, 2022 | |
Python | 5 | Python Distributed Non Negative Matrix Factorization with custom clustering | Jun 07, 2022 | |
Python | 10 | Topic supervised non-negative matrix factorization with sparse matrices | Mar 13, 2022 | |
Python | 2 | Hankel Singular Value Decomposition, Hankel Non-negative Matrix Factorization | Oct 21, 2021 | |
MATLAB | 243 | NMFLibrary: Non-negative Matrix Factorization (NMF) Library: Version 2.1 | Apr 24, 2023 | |
Python | 2 | Non-negative Matrix Factorization with a tree norm regularization. | Jan 04, 2022 | |
MATLAB | 3 | Single Cell RNA-Seq imputAtion constrained By BuLk RNAsEq data (SCRABBLE) | Oct 14, 2020 | |
R | 2 | single cell RNAseq analysis of HFpEF mice model | Feb 01, 2023 | |
Python | 2 | PARAFAC2 for modeling multi-sample single-cell RNAseq. | Mar 13, 2024 | |
Python | 3 | TIME SCALE MODIFICATION OF AUDIO USING NON-NEGATIVE MATRIX FACTORIZATION | Mar 02, 2021 | |
Python | 8 | A Snakemake pipeline for cellranger to process 10x single-cell RNAseq data | Oct 04, 2022 | |
Jupyter Notebook | 4 | An R package to robustly identify subpopulations in single-cell RNASeq data. | Sep 30, 2020 | |
R | 9 | Workflow for the analysis fo single-cell RNASeq data using R/bioconductor | Nov 07, 2022 | |
Python | 2 | Non-negative matrix factorization (NMF) with Gaussian Process priors for simulated Raman spectroscopy data. | Mar 19, 2021 | |
Jupyter Notebook | 5 | Bostongene cell deconvolution algorithm from RNAseq | Aug 15, 2022 |