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Python |
25 |
Spatial Single-Cell Analysis Toolkit |
Jun 29, 2022 |
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Jupyter Notebook |
6 |
Spatial Single Cell transcriptomic library |
Jul 14, 2023 |
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HTML |
29 |
Awesome list of tools and methods to perform spatial transcriptomic data analysis. |
Apr 03, 2023 |
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Jupyter Notebook |
33 |
Spatial Transcriptomic Analysis using Reference-Free auxiliarY deep generative modeling and Shared Histology |
Nov 20, 2023 |
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Jupyter Notebook |
125 |
Spatial alignment of single cell transcriptomic data. |
Aug 05, 2022 |
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R |
15 |
Vesalius: Dissecting Tissue Anatomy from Spatial Transcriptomic Data |
Nov 15, 2022 |
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Python |
16 |
Spatial analysis toolkit for single cell multiplexed tissue data |
Jul 29, 2022 |
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R |
9 |
FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phosphoproteomic … |
Jun 17, 2022 |
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Python |
2 |
This repository will continuously collect annotated spatial single cell transcriptomic datasets. |
Mar 21, 2023 |
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R |
23 |
Single cell RNA-seq analysis for transcriptomic type characterization |
May 31, 2022 |
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R |
53 |
Datasets for spatial analysis |
Aug 04, 2022 |
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C++ |
4 |
Spatial Item Factor Analysis |
Feb 23, 2023 |
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R |
174 |
Spatial omics analysis toolbox |
Apr 23, 2023 |
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C++ |
148 |
spatial signal processing toolkit a.k.a beamforming toolkit 2.0 (BTK2.0) |
May 24, 2023 |
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Python |
89 |
Package with spatial analysis and spatial prediction tools |
Jul 07, 2022 |
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Python |
14 |
Computational design toolkit from Spatial Pixel. |
Jul 04, 2022 |
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Jupyter Notebook |
20 |
Spatial analysis of FISH data |
Nov 26, 2022 |
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Python |
21 |
Spatial Analysis and Data Extraction |
Aug 10, 2020 |
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R |
11 |
A versatile framework for single-cell transcriptomic data analysis in plants. |
Feb 04, 2024 |
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Python |
7 |
Code Analysis Toolkit |
Feb 05, 2023 |
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Python |
6 |
IRC Analysis Toolkit |
Nov 06, 2020 |
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C# |
417 |
Performance analysis toolkit |
May 17, 2023 |
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HTML |
3 |
R functions and analysis scripts for spatial genomics analysis |
Jan 20, 2022 |
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R |
3 |
Bayesian statistical interpolation for spatial analysis |
Feb 24, 2022 |
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None |
3 |
GIS and Spatial Analysis lecture notes |
Feb 27, 2022 |
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JavaScript |
28 |
Intro to spatial analysis in R |
Jul 13, 2022 |
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Python |
50 |
CARTO Spatial Analysis extension for PostgreSQL |
Jul 17, 2022 |
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R |
51 |
Pattern-based spatial analysis in R |
Jul 22, 2022 |
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R |
4 |
Spatial analysis of genome mutation patterns |
Dec 05, 2022 |
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Python |
203 |
Spatial Single Cell Analysis in Python |
Jun 03, 2022 |
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Jupyter Notebook |
24 |
Exploratory Spatial Data Analysis with Python |
Apr 21, 2023 |
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Jupyter Notebook |
2 |
Tutorial about Spark for spatial analysis |
Jul 10, 2018 |
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Python |
4 |
A comprehensive tool to infer TF-centred, spatial gene regulatory networks for the spatially resolved transcriptomic … |
Apr 12, 2023 |
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Shell |
7 |
Bash, awk, R, python scripts and binaries for genomic and transcriptomic data analysis |
Nov 02, 2022 |
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Python |
4 |
toolkit for classifiability analysis |
May 26, 2022 |
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None |
5 |
PGATK: ProteoGenomics Analysis ToolKit |
Aug 19, 2021 |
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Go |
822 |
Go Dependency Analysis toolkit |
Aug 12, 2022 |
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Python |
2 |
OONI Data Analysis ToolKit |
Sep 27, 2019 |
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Python |
3 |
medical image analysis toolkit |
Jun 09, 2022 |
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Java |
21 |
Fast metagenome analysis toolkit |
Feb 15, 2022 |
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Python |
9 |
Ontwerpproject Benchmark Analysis Toolkit |
Jan 28, 2023 |
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C++ |
2 |
Python audio analysis toolkit |
Nov 04, 2022 |
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Python |
8 |
Void Analysis Software Toolkit |
Jan 06, 2023 |
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HTML |
2 |
All to do with spatial data analysis, Raster Image analysis |
May 13, 2021 |
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R |
4 |
Data for Spatial Analysis with R workshops |
Apr 06, 2022 |
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C++ |
4 |
R Package: Regularized Spatial Maximum Covariance Analysis |
May 22, 2022 |
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Python |
5 |
Python library for scale-based spatial analysis |
Mar 14, 2022 |
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HTML |
6 |
Introduction to spatial analysis in R (rasters) |
Aug 17, 2022 |
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C++ |
536 |
GeoDa: An introduction to spatial data analysis |
Aug 14, 2022 |
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Jupyter Notebook |
1051 |
PySAL: Python Spatial Analysis Library Meta-Package |
Aug 09, 2022 |