|
|
Python |
16 |
Spatial analysis toolkit for single cell multiplexed tissue data |
Jul 29, 2022 |
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|
Python |
203 |
Spatial Single Cell Analysis in Python |
Jun 03, 2022 |
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|
Python |
9 |
Toolkit for single-cell DNA methylation analysis. |
Aug 09, 2022 |
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|
R |
12 |
Toolkit for single-cell copy number analysis |
Apr 05, 2023 |
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Python |
15 |
A Python package for single-cell spatial image analysis. |
Apr 28, 2023 |
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|
Jupyter Notebook |
45 |
spatial transcriptome, single cell |
May 03, 2023 |
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|
Python |
4 |
Single-cell Graph-based Regulatory Element Analysis Toolkit |
Feb 19, 2023 |
|
|
Common Workflow Language |
4 |
CWL toolkit for single-cell sequencing data analysis |
Jan 22, 2023 |
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|
Python |
22 |
Digital Cell Sorter (DCS): single cell RNA-seq analysis toolkit. Documentation: |
Apr 12, 2024 |
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Julia |
2 |
A Julia package for single cell and spatial data analysis |
May 07, 2023 |
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Jupyter Notebook |
6 |
Spatial Single Cell transcriptomic library |
Jul 14, 2023 |
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|
R |
2 |
A toolkit for validating single-cell analysis with visualization. |
May 25, 2022 |
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|
Python |
4 |
a python toolkit for single-cell tumor phylogenetic analysis |
Nov 06, 2022 |
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|
R |
441 |
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data |
May 10, 2023 |
|
|
R |
180 |
R toolkit for the analysis of single-cell chromatin data |
Aug 05, 2022 |
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|
R |
3 |
R toolkit for the analysis of single-cell functional heterogeneity |
Apr 12, 2023 |
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|
R |
47 |
Toolkit for Single-Cell Velocity |
Apr 27, 2023 |
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|
R |
2 |
Single Cell Analysis Operations |
Aug 12, 2022 |
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|
Python |
43 |
Single Cell Analysis Pipelines |
Aug 09, 2022 |
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|
Python |
40 |
BESCA (Beyond Single Cell Analysis) offers python functions for single-cell analysis |
Apr 24, 2023 |
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|
Jupyter Notebook |
125 |
Spatial alignment of single cell transcriptomic data. |
Aug 05, 2022 |
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|
Jupyter Notebook |
13 |
Spatial reconstruction of dissociated single-cell data |
Jan 18, 2023 |
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|
JavaScript |
3 |
The mono repo for Aquila, the spatial single cell database and analysis platform |
Mar 10, 2023 |
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|
R |
1535 |
R toolkit for single cell genomics |
Aug 19, 2022 |
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|
R |
2 |
R toolkit for single cell genomics |
Oct 28, 2023 |
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|
Python |
25 |
Algorithms for single-cell analysis |
Oct 21, 2022 |
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|
R |
25 |
Single cell data integrative analysis |
Apr 18, 2023 |
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|
Python |
17 |
Single Cell Analysis Automated Workflow |
Aug 02, 2022 |
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|
R |
34 |
Single-cell Case Control Analysis |
Jul 11, 2022 |
|
|
JavaScript |
19 |
Single cell analysis in Javascript |
Apr 27, 2023 |
|
|
Python |
3 |
Distributed single-cell data analysis. |
Apr 18, 2023 |
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|
R |
75 |
Metacell - Single-cell mRNA Analysis |
Apr 10, 2023 |
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|
HTML |
13 |
single cell sequencing analysis tutorial |
Jun 02, 2022 |
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|
Jupyter Notebook |
60 |
A toolkit of spatial transcriptomic analysis. |
Aug 15, 2022 |
|
|
R |
213 |
A toolkit for single-cell immune profiling |
Apr 21, 2023 |
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|
Python |
14 |
A plugin to visualise 3D spatial single cell omics |
Jul 20, 2023 |
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|
Jupyter Notebook |
6 |
UCLA T32 Single-Cell Analysis Workshop |
Apr 01, 2022 |
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|
HTML |
4 |
Functional analysis of single-cell transcriptomics |
Sep 19, 2022 |
|
|
Python |
22 |
Single-cell fluorescence microscopy data analysis |
Mar 22, 2023 |
|
|
HTML |
82 |
Single cell RNA sequencing analysis course |
Aug 16, 2022 |
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|
R |
4 |
OHSU-ONPRC Single-cell Analysis Package |
Jan 14, 2021 |
|
|
JavaScript |
107 |
Single cell analysis in the browser |
Apr 26, 2023 |
|
|
Java |
19 |
ASAP : Automated Single-cell Analysis Pipeline |
Jan 27, 2023 |
|
|
Python |
40 |
Metacells - Single-cell RNA Sequencing Analysis |
May 05, 2023 |
|
|
R |
22 |
Single cell RNA-seq analysis bundle |
Mar 28, 2023 |
|
|
Python |
15 |
Multi-modal single cell analysis pipelines |
Apr 25, 2023 |
|
|
Jupyter Notebook |
4 |
Primers for single-cell data analysis |
Feb 16, 2023 |
|
|
Python |
2 |
Single-cell RNA Sequencing Data Analysis |
Jul 14, 2023 |
|
|
Jupyter Notebook |
3 |
single cell data analysis for rms |
Jan 31, 2023 |
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|
None |
4 |
Single-cell analysis workshop at HKU |
Jun 14, 2023 |