|
|
C++ |
282 |
Fast Whole-Genome Similarity (ANI) Estimation |
May 21, 2023 |
|
|
Cython |
38 |
Cython bindings and Python interface to HMMER3. |
Aug 16, 2022 |
|
|
None |
4 |
Fast whole genome phylogeny |
Jan 22, 2021 |
|
|
R |
23 |
Allele-specific copy number estimation with whole genome sequencing |
Feb 22, 2023 |
|
|
C++ |
321 |
Fast genome and metagenome distance estimation using MinHash |
Oct 11, 2022 |
|
|
Rust |
13 |
PyO3 bindings and Python interface to skani, a method for fast fast genomic identity calculation … |
Mar 21, 2023 |
|
|
C |
10 |
Cython-based python bindings for libarchive |
Aug 13, 2019 |
|
|
C++ |
98 |
Fast HLA type inference from whole-genome data |
May 04, 2023 |
|
|
Cython |
2 |
Cython bindings and Python interface to Opal, a SIMD-accelerated database search aligner. |
Oct 10, 2022 |
|
|
C++ |
6 |
CRISPR, faster, better – The Crackling method for whole-genome target detection |
May 17, 2023 |
|
|
Cython |
805 |
Cython-based Python bindings for dear imgui |
Jun 29, 2022 |
|
|
C++ |
42 |
Python bindings for ceres-solver (via Cython) |
Mar 09, 2023 |
|
|
Python |
74 |
Python package and CLI for whole-genome duplication related analyses |
May 23, 2023 |
|
|
Python |
4 |
Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence alignments. |
Aug 06, 2022 |
|
|
Python |
3 |
Fast cosine similarity for Python |
Feb 18, 2022 |
|
|
Cython |
7 |
Cython bindings and Python interface to trimAl, a tool for automated alignment trimming. Now with … |
Aug 05, 2022 |
|
|
Cython |
36 |
Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now … |
Jun 27, 2022 |
|
|
C |
6 |
fast bencode for python, based on cython |
May 13, 2023 |
|
|
Rust |
5 |
Simple Python interface to CoverM's fast coverage estimation functions |
Jun 12, 2022 |
|
|
Python |
5 |
libspotify bindings for Python written in Cython (EXPERIMENTAL) |
Jun 30, 2020 |
|
|
Cython |
12 |
🎯 aimrocks 🎸 — python/cython bindings for RocksDB. |
Aug 10, 2022 |
|
|
Python |
56 |
Bottom-up whole-body pose estimation method in constant time. |
Apr 22, 2023 |
|
|
Python |
20 |
Cython bindings for GLFW3 |
Dec 19, 2018 |
|
|
C++ |
121 |
A fast whole-genome aligner based on de Bruijn graphs |
May 19, 2023 |
|
|
Python |
3 |
Fast python codes run with cython :) |
Jul 15, 2022 |
|
|
C++ |
19 |
Towards fast and accurate SNP genotyping from whole genome sequencing data for bedside diagnostics. |
Feb 10, 2023 |
|
|
Python |
4 |
Python Bindings for ImageMagick Magick++ API written in Cython |
Apr 06, 2020 |
|
|
Cython |
6 |
Cython bindings and Python interface to MUSCLE v5, a highly efficient and accurate multiple sequence … |
Jul 23, 2022 |
|
|
Jupyter Notebook |
4 |
A structural molecular similarity metric based on fast MCS estimation |
Aug 24, 2023 |
|
|
Julia |
74 |
Julia for Whole-genome Analysis Software |
Aug 17, 2022 |
|
|
C++ |
29 |
💥 Cython bindings for MurmurHash2 |
Dec 17, 2021 |
|
|
Python |
6 |
cython powered bindings for nanovg |
Aug 11, 2018 |
|
|
Cython |
2 |
Cython bindings for ImGui + ImPlot |
Jan 27, 2024 |
|
|
C++ |
44 |
A kernel-independent fast multipole method library with Python interface. |
May 31, 2023 |
|
|
Python |
9 |
A python library for single cell whole-genome sequencing quality evaluation |
May 10, 2021 |
|
|
Cython |
3 |
Cython bindings and Python interface to the MEME suite, a collection of tools for the … |
Apr 10, 2023 |
|
|
Cython |
2 |
Cython bindings and Pillow plugin for JPEG XL |
Jun 08, 2023 |
|
|
C |
71 |
Whole Genome Simulator for Next-Generation Sequencing |
Jul 21, 2022 |
|
|
Python |
9 |
cython powered bindings for v4l2 capture |
Jun 15, 2022 |
|
|
R |
64 |
Genome wide orthology inference and dNdS estimation |
Apr 26, 2023 |
|
|
Python |
33 |
Fast, lightweight Python database toolkit for SQLite, built with Cython. |
Aug 10, 2022 |
|
|
Python |
5 |
small demo/experimentation project for cython-powered python <-> c++ interface |
Jan 25, 2018 |
|
|
Python |
5 |
A fast Python library for VCF files leveraging Cython for speed. |
Aug 11, 2015 |
|
|
Cython |
3 |
Python wrapper to the PPL library |
Sep 18, 2022 |
|
|
Cython |
4 |
pyimgui: Generate public interfaces from .pyx source files |
Jul 17, 2022 |
|
|
Cython |
4 |
CyDifflib is a fast implementation of difflib's algorithms, which can be used as a drop-in … |
Aug 07, 2022 |
|
|
Cython |
4 |
A low-level execution library for analytic data processing. |
Aug 09, 2022 |
|
|
Cython |
5 |
A Cython port of Flatbush for fast, static 2D spatial indexing |
Jun 15, 2022 |
|
|
Cython |
5 |
Python object-oriented bindings for Ladislav Zezula's CASCLib (https://github.com/ladislav-zezula/CascLib) |
Jun 02, 2022 |
|
|
Cython |
5 |
Wrapper for the macOS signpost API |
Aug 03, 2022 |