|
|
R |
7 |
Single-cell data structures in TileDB |
Jul 09, 2022 |
|
|
R |
2 |
Temporary / skunk laboratory -- otherwise please see TileDB-SOMA |
Jun 06, 2023 |
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|
C# |
5 |
CSharp API for TileDB |
Jun 29, 2022 |
|
|
Jupyter Notebook |
4 |
Single cell ATAC-Seq preprocessing for single cell explorer |
May 29, 2021 |
|
|
R |
19 |
Estimation of Single-Cell Potency with Single Cell Entropy |
May 18, 2023 |
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|
R |
4 |
Single Cell Pipeline |
Aug 19, 2022 |
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|
Jupyter Notebook |
9 |
Single cell pipelines |
Jun 23, 2022 |
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|
MATLAB |
10 |
Single Cell Segmentation |
Nov 04, 2021 |
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|
Python |
37 |
Single Cell Transcriptomics |
Mar 27, 2023 |
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|
JavaScript |
2 |
Single Cell Navigator |
Aug 19, 2022 |
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|
R |
2 |
Single cell codes |
May 11, 2023 |
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|
JavaScript |
107 |
Single cell analysis in the browser |
Apr 26, 2023 |
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|
None |
2 |
Single cell analysis of the JUMP Cell Painting consortium data |
Apr 11, 2023 |
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|
Java |
2 |
TileDB-Cloud-Java contains the Java client for the TileDB Cloud Service |
Oct 24, 2023 |
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|
R |
64 |
Cell type prioritization in single-cell data |
Apr 18, 2023 |
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|
Jupyter Notebook |
16 |
Pytorch implementation of scDeepCluster for Single Cell RNA-seq data |
Apr 30, 2023 |
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|
Python |
2 |
TileDB Connector for Python DB API 2.0 |
Feb 15, 2023 |
|
|
HTML |
9 |
Build predicted cell-cell interaction networks from single-cell data. |
Dec 14, 2022 |
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R |
41 |
Inference of cell-cell communication from single-cell RNAseq data |
Apr 06, 2023 |
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|
R |
2 |
Single Cell Analysis Operations |
Aug 12, 2022 |
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|
Python |
2 |
Single Cell Predictive Marker |
Aug 18, 2022 |
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|
Python |
43 |
Single Cell Analysis Pipelines |
Aug 09, 2022 |
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|
R |
66 |
Single Cell Cluster Evaluation |
Oct 07, 2022 |
|
|
Jupyter Notebook |
129 |
Single cell trajectory detection |
Apr 05, 2023 |
|
|
HTML |
5 |
single-cell scanpy teaching |
Mar 09, 2022 |
|
|
Python |
191 |
Single cell perturbation prediction |
Apr 19, 2023 |
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|
Python |
2 |
Single-cell Iso Prep |
Sep 26, 2022 |
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|
Python |
8 |
Single cell somatic genotyper |
Sep 28, 2022 |
|
|
Rust |
136 |
Single-Cell Genotyping Tool |
Apr 12, 2023 |
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|
Python |
2 |
Single cell epigenome modeling |
Mar 01, 2023 |
|
|
R |
20 |
Single-cell Orientation Tracing |
Apr 20, 2022 |
|
|
Jupyter Notebook |
2 |
single-cell RNA-seq |
Mar 28, 2023 |
|
|
Brainfuck |
8 |
Single-cell Phylogeny Reconstruction |
Dec 24, 2022 |
|
|
Jupyter Notebook |
45 |
spatial transcriptome, single cell |
May 03, 2023 |
|
|
None |
2 |
Single-cell sequencing of the proliferative endometrium |
May 20, 2021 |
|
|
R |
60 |
Assessing the purity of single cell population |
Apr 27, 2023 |
|
|
Jupyter Notebook |
141 |
STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of single-cell data |
Aug 05, 2022 |
|
|
Python |
40 |
BESCA (Beyond Single Cell Analysis) offers python functions for single-cell analysis |
Apr 24, 2023 |
|
|
Python |
12 |
Cell cycle analysis of single-cell proteomic and transcriptomic data for the FUCCI cell model |
Mar 24, 2023 |
|
|
R |
12 |
Identifying cell subpopulational differences among single-cell biospecimens |
Feb 03, 2022 |
|
|
R |
53 |
Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas. |
Apr 14, 2023 |
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|
R |
5 |
Identify cell type based on cell markers for single cell squencing |
Apr 19, 2022 |
|
|
MATLAB |
13 |
The Single-Cell Pathology Landscape of Breast Cancer |
Aug 08, 2022 |
|
|
Jupyter Notebook |
8 |
The C. elegans transcriptome at single cell resolution |
Apr 13, 2022 |
|
|
None |
2 |
Teaching material for the single-cell course 2022 |
May 02, 2023 |
|
|
Jupyter Notebook |
9 |
The million-scale method for single-cell analysis |
Aug 02, 2022 |
|
|
Jupyter Notebook |
40 |
Identify cell barcodes from single-cell genomics sequencing experiments |
May 06, 2022 |
|
|
Jupyter Notebook |
106 |
Discovering novel cell types across heterogenous single-cell experiments |
Apr 07, 2023 |
|
|
HTML |
4 |
Single-cell COPy number Estimation |
Oct 07, 2019 |
|
|
Python |
7 |
Single Cell RNA-seq Pipeline |
May 18, 2022 |