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Python |
2 |
SIMS: Scalable, Interpretable Models for Cell Annotation of large scale single-cell RNA-seq data |
Nov 27, 2023 |
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HTML |
2 |
Cluster single cell RNA-seq data |
Sep 30, 2020 |
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R |
3 |
SCalable Inference of Regulatory Activity in Single Cell RNA-Seq data |
Apr 13, 2023 |
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R |
4 |
Analysis of single-cell RNA-seq data using topic models. |
Mar 24, 2023 |
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Jupyter Notebook |
2 |
single-cell RNA-seq |
Mar 28, 2023 |
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Jupyter Notebook |
84 |
scDeepCluster for Single Cell RNA-seq data |
Apr 18, 2023 |
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JavaScript |
135 |
R package for analyzing and interactively exploring large-scale single-cell RNA-seq datasets |
Aug 07, 2022 |
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Python |
7 |
Single Cell RNA-seq Pipeline |
May 18, 2022 |
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Shell |
2 |
Single Cell RNA-Seq Imputation |
Mar 31, 2021 |
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Python |
2 |
Single cell RNA-seq tools |
Jul 20, 2022 |
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Python |
4 |
single-cell RNA-seq clustering |
Jul 27, 2021 |
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Jupyter Notebook |
39 |
Dynamic models for single-cell RNA-seq time series. |
Apr 15, 2023 |
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Python |
4 |
Single-cell RNA-seq data analysis and visualization |
Jun 12, 2022 |
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TeX |
2 |
Analysis of single cell RNA-seq data course |
Sep 25, 2019 |
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Jupyter Notebook |
2 |
Doublet detection in single-cell RNA-seq data. |
May 19, 2020 |
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None |
27 |
Detect doublets in single-cell RNA-seq data |
Apr 05, 2023 |
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TeX |
49 |
Analysis of single cell RNA-seq data course |
Apr 23, 2023 |
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Python |
36 |
Dimensionality reduction for single cell RNA-seq data |
Dec 09, 2022 |
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Python |
3 |
Doublet detection in single-cell RNA-seq data. |
Aug 22, 2018 |
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Jupyter Notebook |
16 |
Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation |
Jul 08, 2022 |
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R |
3 |
A single-cell RNA-seq pipeline |
Apr 20, 2023 |
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Rust |
41 |
Single-Cell RNA-seq pseudo-aligner |
Mar 22, 2023 |
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R |
22 |
Single cell RNA-seq analysis bundle |
Mar 28, 2023 |
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R |
2 |
Preprocessing of Droplet-based Single-Cell RNA-seq Data |
Sep 24, 2020 |
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R |
163 |
R package for analyzing single-cell RNA-seq data |
Apr 03, 2023 |
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Python |
155 |
Differential expression analysis for single-cell RNA-seq data. |
Apr 06, 2023 |
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None |
2 |
Differential expression analysis for single-cell RNA-seq data |
Apr 14, 2021 |
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Jupyter Notebook |
28 |
Supervised Adversarial Alignment of Single-Cell RNA-seq Data |
Jul 15, 2022 |
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TeX |
49 |
Count HLA alleles in single-cell RNA-seq data |
Apr 19, 2023 |
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R |
9 |
Differential expression analysis for single-cell RNA-seq data |
Nov 15, 2022 |
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None |
3 |
Analysis code for lungfish single cell RNA-seq data |
Sep 22, 2023 |
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R |
21 |
an integrative analysis tool for analysing large-scale single cell RNA-sequencing data |
Apr 13, 2023 |
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Python |
5 |
RNA-seq data amalgamation for a large-scale evolutionary transcriptomics |
Dec 14, 2022 |
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R |
8 |
Core utilities for single-cell RNA-seq |
Dec 12, 2021 |
|
R |
342 |
Inferring CNV from Single-Cell RNA-Seq |
Aug 10, 2022 |
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R |
2 |
Adaptive Visualization for Single-cell RNA-seq |
Apr 07, 2023 |
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Jupyter Notebook |
2 |
Single cell RNA-seq of human melanocytes |
Sep 23, 2021 |
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Jupyter Notebook |
63 |
Preprocessing of single-cell RNA-Seq (deprecated) |
Apr 08, 2022 |
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HTML |
19 |
HSCI/Catalyst Single-cell RNA-Seq Workshop |
Aug 29, 2022 |
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R |
2 |
single cell RNA-seq results report system |
Aug 08, 2023 |
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Python |
3 |
Discovering causal transcription factors from single-cell RNA-seq data |
Oct 03, 2022 |
|
HTML |
11 |
Isoform co-usage networks from single-cell RNA-seq data |
Dec 03, 2022 |
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Jupyter Notebook |
16 |
Pytorch implementation of scDeepCluster for Single Cell RNA-seq data |
Apr 30, 2023 |
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R |
2 |
GCA: Gene Correlation Analysis for Single-cell RNA-seq data |
Jun 06, 2019 |
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Python |
9 |
Visualize cancer genomes with FAIR single-cell RNA-seq data |
Feb 01, 2022 |
|
Python |
26 |
AutoImpute : Autoencoder based imputation of single cell RNA-seq data |
Feb 14, 2023 |
|
R |
6 |
A robust and accurate cell type classifier for single cell RNA-seq data |
Jun 14, 2022 |
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Makefile |
22 |
Examples analyses using the single-cell RNA-seq data from mouse cell atlases |
May 20, 2022 |
|
R |
39 |
Algorithm for the inference of cell types from single-cell RNA-seq data. |
Feb 15, 2023 |
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Python |
3 |
Single Cell RNA-seq Analysis by Topic Modeling |
May 24, 2022 |