|
|
Python |
3 |
A small ncRNA workflow in Snakemake. |
Dec 07, 2022 |
|
|
Python |
199 |
This Snakemake pipeline implements the GATK best-practices workflow |
Apr 23, 2023 |
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|
Nextflow |
2 |
A best-practice exome analysis workflow. |
Jun 28, 2023 |
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|
Python |
11 |
Ancient microbiome snakemake workflow |
Mar 15, 2023 |
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|
Python |
12 |
Snakemake workflow for neoantigen prediction |
Apr 28, 2023 |
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|
Python |
2 |
Snakemake Workflow For WGBS Data |
Jan 10, 2022 |
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|
Python |
8 |
A snakemake workflow for metagenomic projects |
Apr 01, 2022 |
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|
Python |
2 |
Snakemake workflow for comprehensive ONT analysis |
Mar 31, 2023 |
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|
Python |
2 |
A Snakemake workflow for fungal metatranscriptomics |
Feb 15, 2022 |
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|
Python |
3 |
Snakemake workflow for evaluation of assemblies |
Mar 07, 2022 |
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|
Python |
4 |
snakemake workflow comparing Genrich and MACS2 |
Nov 09, 2020 |
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|
Python |
8 |
Snakemake workflow for the vg toolkit. |
Apr 25, 2023 |
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|
Python |
5 |
Snakemake workflow to call germline variant |
Oct 15, 2019 |
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Python |
3 |
Some NGS workflow created by snakemake |
Apr 21, 2023 |
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|
Python |
2 |
A snakemake workflow for using tsinfer |
Oct 30, 2023 |
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|
Python |
5 |
snakemake workflow for bulk RNA-seq workflow using STAR-edgeR |
Oct 25, 2022 |
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|
Python |
14 |
snakemake workflow for post-processing scATACseq data |
Oct 04, 2022 |
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|
Python |
3 |
Snakemake workflow to analyze bulk RNA-seq |
Nov 08, 2022 |
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|
Jupyter Notebook |
9 |
Modular snakemake workflow for assembly-based metagenomics |
Dec 06, 2022 |
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|
Python |
2 |
A snakemake workflow for assembly with HiFi |
May 01, 2024 |
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R |
4 |
RNA-Seq Workflow Based on Snakemake and Conda |
May 28, 2020 |
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|
Python |
3 |
A Snakemake workflow for germline variant burden analyses. |
Mar 23, 2022 |
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|
Shell |
41 |
A Github action for running a Snakemake workflow |
Jun 15, 2022 |
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|
Python |
4 |
Snakemake workflow implementing Accel Amplicon (Swift) trimming guidelines. |
Jun 25, 2019 |
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|
R |
8 |
Snakemake workflow to benchmark scRNA-seq data simulators |
Feb 11, 2023 |
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|
Python |
7 |
Snakemake workflow for comparison of differential abundance ranks |
Aug 14, 2022 |
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|
Python |
8 |
A Snakemake workflow for Fermi-LAT data reduction |
Oct 27, 2023 |
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|
TeX |
32 |
A bioinformatics tutorial demonstrating a best-practice workflow to review a flowcell's sequence_summary.txt |
Mar 31, 2023 |
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None |
6 |
Laravel Best Practice |
Jul 31, 2022 |
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|
Vue |
23 |
Vuex best practice |
Nov 02, 2021 |
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|
Python |
33 |
scrapy best practice |
Aug 21, 2021 |
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|
None |
2 |
sharding-best-practice |
Apr 30, 2020 |
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|
JavaScript |
2 |
solidity best practice |
Oct 29, 2022 |
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|
HCL |
2 |
terraform best practice |
Apr 19, 2023 |
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Python |
4 |
NetBrain Best Practice |
Oct 07, 2022 |
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|
HTML |
5 |
bioinformatics best practice |
Jan 31, 2023 |
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|
TypeScript |
2 |
Nest best practice |
Oct 10, 2023 |
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|
JavaScript |
2 |
sener-best-practice |
Jun 14, 2023 |
|
|
Python |
2 |
Reproducibility and package management : workflow languages (CWL, Snakemake, Conda). |
Aug 03, 2022 |
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|
R |
3 |
Snakemake workflow for 10X Genomics WGS analysis using TitanCNA |
Apr 20, 2022 |
|
|
Python |
5 |
A repo for the Twist HiFi capture/snakemake workflow |
Apr 20, 2023 |
|
|
Python |
29 |
Amplicon sequence processing workflow using QIIME 2 and Snakemake |
Apr 01, 2023 |
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|
Shell |
2 |
A generic best practice workflow for processing human Oxford Nanopore Technologies (ONT) sequencing data. |
Mar 29, 2024 |
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|
Python |
2 |
Snakemake BIDS app for denoising fmriprep, uses the snakebids package for running snakemake workflow as … |
Jul 18, 2021 |
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|
Python |
4 |
Snakemake-based workflow for generating artificial genomes with structural variants |
Feb 03, 2022 |
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|
Python |
5 |
Snakemake workflow for functional analysis of metagenomic WGS read data. |
Mar 12, 2022 |
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|
Python |
5 |
Snakemake workflow for modelling-to-generate-alternatives with PyPSA-Eur |
Jun 03, 2022 |
|
|
Python |
3 |
Command line bioinformatics workflows, created with Snakemake workflow management tool. |
Mar 26, 2021 |
|
|
Python |
28 |
Amplicon sequencing workflow heavily using DADA2 and implemented in snakemake |
May 10, 2022 |
|
|
Python |
42 |
Snakemake-based workflow for detecting structural variants in WGS data |
Jul 31, 2022 |