|
Python |
12 |
Cell cycle analysis of single-cell proteomic and transcriptomic data for the FUCCI cell model |
Mar 24, 2023 |
|
R |
23 |
Single cell RNA-seq analysis for transcriptomic type characterization |
May 31, 2022 |
|
Python |
7 |
Single Cell RNA-seq Pipeline |
May 18, 2022 |
|
R |
7 |
Characterizing and inferring quantitative cell cycle phase in single-cell RNA-seq data analysis |
Feb 15, 2023 |
|
R |
3 |
A single-cell RNA-seq pipeline |
Apr 20, 2023 |
|
HTML |
18 |
scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data |
May 14, 2023 |
|
C++ |
72 |
Pipeline for initial analysis of droplet-based single-cell RNA-seq data |
Jul 07, 2022 |
|
Python |
4 |
Single-cell RNA-seq data analysis and visualization |
Jun 12, 2022 |
|
TeX |
2 |
Analysis of single cell RNA-seq data course |
Sep 25, 2019 |
|
TeX |
49 |
Analysis of single cell RNA-seq data course |
Apr 23, 2023 |
|
R |
22 |
Single cell RNA-seq analysis bundle |
Mar 28, 2023 |
|
Python |
155 |
Differential expression analysis for single-cell RNA-seq data. |
Apr 06, 2023 |
|
None |
2 |
Differential expression analysis for single-cell RNA-seq data |
Apr 14, 2021 |
|
R |
9 |
Differential expression analysis for single-cell RNA-seq data |
Nov 15, 2022 |
|
None |
3 |
Analysis code for lungfish single cell RNA-seq data |
Sep 22, 2023 |
|
HTML |
2 |
Cluster single cell RNA-seq data |
Sep 30, 2020 |
|
R |
9 |
Repository for CCBR single cell RNA-Seq pipeline |
Jun 16, 2022 |
|
Shell |
9 |
Cluster-specific pseudo-bulk analysis of 10X single-cell RNA-seq data by connecting Seurat to the VBC RNA-seq … |
Sep 14, 2022 |
|
R |
4 |
Analysis of single-cell RNA-seq data using topic models. |
Mar 24, 2023 |
|
R |
2 |
GCA: Gene Correlation Analysis for Single-cell RNA-seq data |
Jun 06, 2019 |
|
Jupyter Notebook |
2 |
single-cell RNA-seq |
Mar 28, 2023 |
|
Python |
3 |
Single Cell RNA-seq Analysis by Topic Modeling |
May 24, 2022 |
|
Python |
4 |
Single Cell RNA-Seq analysis toolbox for Python |
Sep 13, 2018 |
|
Groovy |
3 |
A Nextflow pipeline for single-cell RNA-Seq dataset |
Apr 21, 2024 |
|
Jupyter Notebook |
84 |
scDeepCluster for Single Cell RNA-seq data |
Apr 18, 2023 |
|
R |
242 |
Table of software for the analysis of single-cell RNA-seq data. |
Aug 13, 2022 |
|
R |
3 |
Table of software for the analysis of single-cell RNA-seq data. |
Apr 08, 2022 |
|
R |
2 |
Analysis Pipeline for Single Cell ATAC-seq |
Jul 30, 2022 |
|
TeX |
27 |
Repo for Physalia course Analysis of Single Cell RNA-Seq data |
Apr 11, 2022 |
|
Shell |
2 |
Single Cell RNA-Seq Imputation |
Mar 31, 2021 |
|
Python |
2 |
Single cell RNA-seq tools |
Jul 20, 2022 |
|
Python |
4 |
single-cell RNA-seq clustering |
Jul 27, 2021 |
|
Python |
3 |
RNA seq analysis pipeline |
Nov 07, 2022 |
|
Python |
22 |
Digital Cell Sorter (DCS): single cell RNA-seq analysis toolkit. Documentation: |
Apr 12, 2024 |
|
HTML |
2 |
Single-cell RNA-seq Analysis of Metastatic Melanoma Tumors |
May 06, 2023 |
|
R |
114 |
Signature Analysis and Visualization for Single-Cell RNA-seq |
Apr 18, 2023 |
|
R |
30 |
R package for bcbio single-cell RNA-seq analysis. |
Apr 22, 2023 |
|
Nextflow |
14 |
A pipeline for processing single cell RNA-seq data generated with the SmartSeq2 protocol. |
Apr 08, 2022 |
|
Jupyter Notebook |
2 |
Doublet detection in single-cell RNA-seq data. |
May 19, 2020 |
|
None |
27 |
Detect doublets in single-cell RNA-seq data |
Apr 05, 2023 |
|
Python |
36 |
Dimensionality reduction for single cell RNA-seq data |
Dec 09, 2022 |
|
Python |
3 |
Doublet detection in single-cell RNA-seq data. |
Aug 22, 2018 |
|
Jupyter Notebook |
2 |
Analysis of single-cell single-embryo RNA seq data from the zebrafish developmental atlas Zebrahub. |
Dec 11, 2023 |
|
HTML |
3 |
Visualization and analysis of single-cell RNA-seq data by alternative clustering |
May 10, 2022 |
|
Python |
2 |
Single-cell RNA Sequencing Data Analysis |
Jul 14, 2023 |
|
None |
13 |
List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc. |
Dec 01, 2022 |
|
None |
3 |
List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc. |
Jun 17, 2017 |
|
None |
4 |
List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc. |
Oct 28, 2018 |
|
Rust |
41 |
Single-Cell RNA-seq pseudo-aligner |
Mar 22, 2023 |
|
Java |
6 |
Single-Cell RNA Seq analysis and visualization package for Cytoscape |
Feb 14, 2022 |