Stars
7
Forks
0
Language
Python
Last Updated
Feb 27, 2024
Similar Repos
Repo | Language | Stars | Description | Updated At |
---|---|---|---|---|
Python | 23 | Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets | Mar 01, 2023 | |
Python | 6 | Detection and tracking of overlapping cell nuclei for large scale mitosis analyses | Aug 16, 2022 | |
Python | 22 | Utilities for large scale distributed single cell data processing | Mar 24, 2023 | |
HTML | 16 | scGEAToolbox: Matlab toolbox for single-cell gene expression analyses | Apr 28, 2023 | |
R | 67 | EcoTyper is a machine learning framework for large-scale identification of cell states and cellular ecosystems … | Jul 05, 2022 | |
C++ | 2 | inferCSN: a method for inferring cell-type specific gene regulatory network from single-cell RNA data | Oct 12, 2023 | |
Python | 9 | Large Scale Sea level visualizations of unstructured mesh data | Jul 06, 2022 | |
None | 2 | Benchmarking R & Bioconductor performance working with large-scale single-cell data | Sep 30, 2020 | |
Python | 3 | SIMS: Scalable, Interpretable Models for Cell Annotation of large scale single-cell RNA-seq data | Dec 21, 2022 | |
Python | 2 | SIMS: Scalable, Interpretable Models for Cell Annotation of large scale single-cell RNA-seq data | Nov 27, 2023 | |
Python | 62 | Fast visualization tool for large-scale and high dimensional single-cell data | Mar 20, 2023 | |
Jupyter Notebook | 9 | The million-scale method for single-cell analysis | Aug 02, 2022 | |
Jupyter Notebook | 3 | LogBTFs: A method of inferring gene regulatory network from single-cell gene expression data using Boolean … | Nov 19, 2023 | |
Julia | 6 | Dynamical information enables inference of gene regulation at single-cell scale | Jan 29, 2023 | |
R | 21 | an integrative analysis tool for analysing large-scale single cell RNA-sequencing data | Apr 13, 2023 | |
R | 8 | Browse the Human Cell Atlas data portal | Aug 08, 2022 | |
R | 2 | Human Cell Atlas data discovery and retrieval | Feb 07, 2024 | |
Python | 3 | A Snakemake workflow for large-scale SARS-CoV-2 analyses. | Mar 23, 2022 | |
R | 20 | Inferring gene co-expression networks from single cell gene expression data | Feb 07, 2023 | |
Python | 13 | Tools for generating single-cell gene expression data | Mar 10, 2023 | |
HTML | 6 | Strategies for leveraging workflow systems to streamline large-scale biological analyses | Aug 29, 2021 | |
Python | 38 | A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data | Apr 19, 2023 | |
HTML | 2 | A visualization method for large-scale node-edge graphs | Jul 28, 2023 | |
Python | 7 | zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters. | May 06, 2023 | |
R | 24 | Gene set enrichment analysis for single-cell RNAseq data | May 17, 2023 | |
Makefile | 22 | Examples analyses using the single-cell RNA-seq data from mouse cell atlases | May 20, 2022 | |
CSS | 5 | Truncate table cell data (long integers). Overflow/hover technique. | Mar 01, 2023 | |
Shell | 7 | Large-scale Data Analysis supplementary material. | Apr 05, 2023 | |
Jupyter Notebook | 35 | A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data. | Sep 25, 2022 | |
Python | 41 | Code for text augmentation method leveraging large-scale language models | Aug 17, 2022 | |
R | 3 | A heuristic method for fast BCR clonal family inference from large-scale AIRR-seq data | Mar 06, 2024 | |
C | 106 | MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics | Aug 05, 2022 | |
Shell | 10 | Higher level repo for aggregating all of Atlas workflow logic for Single Cell | Jul 12, 2022 | |
Jupyter Notebook | 4 | Tools for mechanistic gene network inference from single-cell data | May 01, 2023 | |
R | 2 | GCA: Gene Correlation Analysis for Single-cell RNA-seq data | Jun 06, 2019 | |
R | 8 | Holds the code and data to reproduce the analyses of Danaher & Kim et a;, … | Mar 27, 2023 | |
Python | 388 | Open Data Cube analyses continental scale Earth Observation data through time | Aug 12, 2022 | |
Python | 2 | Open Data Cube analyses continental scale Earth Observation data through time | Apr 24, 2021 | |
Python | 2 | Open Data Cube analyses continental scale Earth Observation data through time | Sep 30, 2022 | |
Python | 4 | large scale GC-MS data preprocessing workflow | Feb 22, 2021 | |
Python | 20 | Large-scale Visualization Data Storage in Python | May 10, 2022 | |
Java | 3 | Hadoop library for large-scale data processing | Feb 17, 2021 | |
Jupyter Notebook | 6 | Evaluating the effect of technical sources of variability in large-scale gene expression compendia. | Apr 07, 2021 | |
C# | 3 | InfernoRDN can perform various downstream analyses on large scale datasets from proteomics and microarrays | Nov 19, 2021 | |
C++ | 114 | A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0 | Aug 07, 2022 | |
R | 20 | An interpretable simulator that generates realistic single-cell gene expression count data with gene correlations recapitulated | May 16, 2023 | |
Jupyter Notebook | 2 | A pathway-inferring VAE modification for single-cell gene expression data | Dec 03, 2022 | |
R | 2 | Perform Exploratory Computational Analyses on Processed Single-Cell RNA-Sequencing Data | Apr 28, 2022 | |
JavaScript | 4 | t-SNE plot widget to visualise Single Cell Expression Atlas data | Jan 27, 2021 | |
Python | 3 | Secondary Analysis Service of the Human Cell Atlas Data Coordination Platform | Jul 17, 2020 |